RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TMEM189-UBE2V1I3L0A0 370 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TM7SF2O76062 418 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 OAZ2O95190 189 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 OR4Q2P0C623 313 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 PTDSS1P48651 473 aaKnown RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 IDH3AP50213 366 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TUBB3Q13509 450 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 SLC12A1Q13621 1099 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 USP10Q14694 798 aaKnown RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 GRM3Q14832 879 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 POU6F1Q14863 301 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TAF11Q15544 211 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 DLG2Q15700 870 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TRIM71Q2Q1W2 868 aaKnown RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 ACSBG2Q5FVE4 666 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 SLC24A5Q71RS6 500 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 RNF180Q86T96 592 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 CNTN4Q8IWV2 1026 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 SCUBE1Q8IWY4 988 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 NUP93Q8N1F7 819 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 FICDQ9BVA6 458 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 UBE2OQ9C0C9 1292 aaKnown RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 ZCWPW1Q9H0M4 648 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TASP1Q9H6P5 420 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TBC1D13Q9NVG8 400 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 SCML2Q9UQR0 700 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TLR6Q9Y2C9 796 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 FNDC1Q4ZHG4 1894 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 CCDC78A2IDD5 438 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 WASH4PA8MWX3 477 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 F8W810 466 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 F8W8V4 182 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 SIN3BO75182 1162 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 HLA-DQB2P05538 268 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 ATXN8OSP0DMR3 200 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 COL6A2P12110 1019 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 ABCG1P45844 678 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 PAPOLAP51003 745 aaKnown RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 MLLT6P55198 1093 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TSNAXIP1Q2TAA8 658 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 RABGAP1LQ5R372 815 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 ARMC3Q5W041 872 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 AFMIDQ63HM1 303 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 GABPB2Q8TAK5 448 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 CMTM5Q96DZ9 223 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 FAM193BQ96PV7 902 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 MYCBPQ99417 103 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-208ENST00000496116 PRKD2Q9BZL6 878 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 CDH19Q9H159 772 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 NMUR1Q9HB89 426 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 OXSMQ9NWU1 459 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 NUDT5Q9UKK9 219 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 TCAF1Q9Y4C2 921 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 DDHD2O94830 711 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 LUC7L3O95232 432 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 VAPBO95292 243 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 PSMG1O95456 288 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 AHSGP02765 367 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 SAT1P21673 171 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ADRA1AP35348 466 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 GMPRP36959 345 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 OR1G1P47890 313 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 CSRP3P50461 194 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 HK2P52789 917 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 CLNS1AP54105 237 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 DSC1Q08554 894 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 THOC5Q13769 683 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 RCN1Q15293 331 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ZRSR2Q15696 482 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 TRMT5Q32P41 509 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 FSCBQ5H9T9 825 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 NOMO2Q5JPE7 1267 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 LIPMQ5VYY2 423 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 NAF1Q96HR8 494 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 C8orf48Q96LL4 319 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ZNF570Q96NI8 536 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 THTPAQ9BU02 230 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ACE2Q9BYF1 805 aaPredicted RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 BATF3Q9NR55 127 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 NDFIP2Q9NV92 336 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 MPP6Q9NZW5 540 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 IPO11Q9UI26 975 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 PLA2G4CQ9UP65 541 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 TLL2Q9Y6L7 1015 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 NYNRINQ9P2P1 1898 aaKnown RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ZNF195O14628 629 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 PMPCBO75439 489 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 F7P08709 466 aaPredicted RBP11.23□□□□□ -0.61
CMSS1-208ENST00000496116 CKBP12277 381 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 STMN1P16949 149 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 ARRB2P32121 409 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 GCKP35557 465 aa11.23□□□□□ -0.61
CMSS1-208ENST00000496116 VHLP40337 213 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms