RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 UNC5BQ8IZJ1 945 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 LILRA2Q8N149 483 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 CHCHD4Q8N4Q1 142 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 ATG16L2Q8NAA4 619 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 RNF149Q8NC42 400 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 NAXEQ8NCW5 288 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 DEFB124Q8NES8 71 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 ITFG1Q8TB96 612 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 PRPF31Q8WWY3 499 aaKnown RBP4.6□□□□□ -1.67
VPS52-222ENST00000495981 GAD1Q99259 594 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 PAAF1Q9BRP4 392 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 SORBS1Q9BX66 1292 aaKnown RBP4.6□□□□□ -1.67
VPS52-222ENST00000495981 NFKBIZQ9BYH8 718 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 CXCL16Q9H2A7 254 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 WDCPQ9H6R7 721 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 MANSC1Q9H8J5 431 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 BCO1Q9HAY6 547 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 DLL4Q9NR61 685 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 HEBP1Q9NRV9 189 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 MRPL17Q9NRX2 175 aaKnown RBP4.6□□□□□ -1.67
VPS52-222ENST00000495981 KCND1Q9NSA2 647 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 NRBP2Q9NSY0 501 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 ZDHHC7Q9NXF8 308 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 RGL1Q9NZL6 768 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 STK39Q9UEW8 545 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 NDRG2Q9UN36 371 aaKnown RBP4.6□□□□□ -1.67
VPS52-222ENST00000495981 MAGED2Q9UNF1 606 aaPredicted RBP4.6□□□□□ -1.67
VPS52-222ENST00000495981 KCNJ14Q9UNX9 436 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 NEUROG3Q9Y4Z2 214 aa4.6□□□□□ -1.67
VPS52-222ENST00000495981 BSNQ9UPA5 3926 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 AQP12BA6NM10 295 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 EIF3FO00303 357 aaPredicted RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 SYT5O00445 386 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CITO14578 2027 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ADAM12O43184 909 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 PRAMEF4O60810 478 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ADAM23O75077 832 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 SF3B1O75533 1304 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS52-222ENST00000495981 SKAP2O75563 359 aaPredicted RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 RNASEH2AO75792 299 aaKnown RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 ERLIN2O94905 339 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 EPN2O95208 641 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 LYPLA2O95372 231 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 MATN4O95460 622 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 LARGE1O95461 756 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 C1RP00736 705 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CKMT1AP12532 417 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ANK1P16157 1881 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 FCARP24071 287 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 IGFBP6P24592 240 aaPredicted RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 KLRC2P26717 231 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 HOXA9P31269 272 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ARL2P36404 184 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 SERPINF1P36955 418 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CASP2P42575 452 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 GLRBP48167 497 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 PXNP49023 591 aaPredicted RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 RARRES1P49788 294 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ITGA8P53708 1063 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ARL4CP56559 192 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 MPP1Q00013 466 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CYP4A11Q02928 519 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 TAF5Q15542 800 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 TRIP11Q15643 1979 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 GRAMD4Q6IC98 578 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 GALNT17Q6IS24 598 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 NOTUMQ6P988 496 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 PCSK4Q6UW60 755 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 PRSS55Q6UWB4 352 aaPredicted RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 KRBA2Q6ZNG9 492 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 RUFY3Q7L099 469 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CXXC5Q7LFL8 322 aaKnown RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 MAATS1Q7Z4T9 603 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CDR2LQ86X02 465 aaPredicted RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 MARCH9Q86YJ5 346 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 GPR65Q8IYL9 337 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 PQLC1Q8N2U9 271 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 STPG3Q8N7X2 389 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 OR7D4Q8NG98 312 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 MDM1Q8TC05 714 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 STT3BQ8TCJ2 826 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 HASPINQ8TF76 798 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 SMG7Q92540 1137 aaKnown RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 RABGGTAQ92696 567 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ZNF566Q969W8 418 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CPB2Q96IY4 423 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CEP170P1Q96L14 293 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 FAM20AQ96MK3 541 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 HEPHQ9BQS7 1158 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 JPH2Q9BR39 696 aaPredicted RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 NT5C3AQ9H0P0 336 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 PDZD7Q9H5P4 517 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 LMAN1LQ9HAT1 526 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 VPS45Q9NRW7 570 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 MBNL3Q9NUK0 354 aaKnown RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 PIH1D1Q9NWS0 290 aaKnown RBP4.59□□□□□ -1.67
VPS52-222ENST00000495981 MIOSQ9NXC5 875 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 ARHGAP20Q9P2F6 1191 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 FEZ2Q9UHY8 353 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms