RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PIK3CGP48736 1102 aa7□□□□□ -1.29
VIM-207ENST00000495528 NKX6-1P78426 367 aaPredicted RBP7□□□□□ -1.29
VIM-207ENST00000495528 HSD11B2P80365 405 aa7□□□□□ -1.29
VIM-207ENST00000495528 LAMTOR4Q0VGL1 99 aa7□□□□□ -1.29
VIM-207ENST00000495528 SPECC1Q5M775 1068 aa7□□□□□ -1.29
VIM-207ENST00000495528 CYP26C1Q6V0L0 522 aa7□□□□□ -1.29
VIM-207ENST00000495528 SRGAP1Q7Z6B7 1085 aa7□□□□□ -1.29
VIM-207ENST00000495528 GGNQ86UU5 652 aa7□□□□□ -1.29
VIM-207ENST00000495528 PALB2Q86YC2 1186 aa7□□□□□ -1.29
VIM-207ENST00000495528 FAM90A1Q86YD7 464 aa7□□□□□ -1.29
VIM-207ENST00000495528 AOPEPQ8N6M6 819 aa7□□□□□ -1.29
VIM-207ENST00000495528 CELF5Q8N6W0 485 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 TMIEQ8NEW7 156 aa7□□□□□ -1.29
VIM-207ENST00000495528 SMG7Q92540 1137 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 WASF1Q92558 559 aa7□□□□□ -1.29
VIM-207ENST00000495528 STAMQ92783 540 aa7□□□□□ -1.29
VIM-207ENST00000495528 ZNF707Q96C28 371 aaPredicted RBP7□□□□□ -1.29
VIM-207ENST00000495528 CEP170P1Q96L14 293 aa7□□□□□ -1.29
VIM-207ENST00000495528 B3GALT6Q96L58 329 aa7□□□□□ -1.29
VIM-207ENST00000495528 MBOAT7Q96N66 472 aa7□□□□□ -1.29
VIM-207ENST00000495528 GAD1Q99259 594 aa7□□□□□ -1.29
VIM-207ENST00000495528 JPH2Q9BR39 696 aaPredicted RBP7□□□□□ -1.29
VIM-207ENST00000495528 RPP25Q9BUL9 199 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 ZNF747Q9BV97 191 aa7□□□□□ -1.29
VIM-207ENST00000495528 HERC2P3Q9BVR0 1158 aa7□□□□□ -1.29
VIM-207ENST00000495528 SLC46A2Q9BY10 475 aa7□□□□□ -1.29
VIM-207ENST00000495528 EIF2AQ9BY44 585 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 NT5C3AQ9H0P0 336 aa7□□□□□ -1.29
VIM-207ENST00000495528 MRPL46Q9H2W6 279 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 TBC1D17Q9HA65 648 aa7□□□□□ -1.29
VIM-207ENST00000495528 AKIP1Q9NQ31 210 aa7□□□□□ -1.29
VIM-207ENST00000495528 SH3GLB2Q9NR46 395 aa7□□□□□ -1.29
VIM-207ENST00000495528 DLGAP2Q9P1A6 1054 aa7□□□□□ -1.29
VIM-207ENST00000495528 CDYLQ9Y232 598 aa7□□□□□ -1.29
VIM-207ENST00000495528 SSX2IPQ9Y2D8 614 aa7□□□□□ -1.29
VIM-207ENST00000495528 MYRFQ9Y2G1 1151 aa7□□□□□ -1.29
VIM-207ENST00000495528 KIF3AQ9Y496 699 aa7□□□□□ -1.29
VIM-207ENST00000495528 HES2Q9Y543 173 aa7□□□□□ -1.29
VIM-207ENST00000495528 CLUHO75153 1309 aa7□□□□□ -1.29
VIM-207ENST00000495528 CNTNAP2Q9UHC6 1331 aa7□□□□□ -1.29
VIM-207ENST00000495528 GVINP1Q7Z2Y8 2422 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 A0A1B0GTW7 788 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 ARL5CA6NH57 179 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 ZNF785A8K8V0 405 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 H3BQV1 296 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 RNASET2O00584 256 aaKnown RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 SLC37A4O43826 429 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 GLUD1P00367 558 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 FTH1P19P0C7X4 201 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 LAMP2P13473 410 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 GLULP15104 373 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 MLH1P40692 756 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 QARSP47897 775 aaKnown RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 GLUD2P49448 558 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 DSC1Q08554 894 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 TRIM29Q14134 588 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 NONOQ15233 471 aaKnown RBP eCLIP6.99□□□□□ -1.29
VIM-207ENST00000495528 NPY5RQ15761 445 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 MIIPQ5JXC2 388 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 GET4Q7L5D6 327 aaPredicted RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 KIAA2013Q8IYS2 634 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 BLIDQ8IZY5 108 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 DCLK2Q8N568 766 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 RNF149Q8NC42 400 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 CNNM3Q8NE01 707 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 PSPC1Q8WXF1 523 aaKnown RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 CPB2Q96IY4 423 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 C8orf76Q96K31 380 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 KLHL32Q96NJ5 620 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 NT5C1BQ96P26 610 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 B3GNT5Q9BYG0 378 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 KRTAP4-11Q9BYQ6 195 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 DHX33Q9H6R0 707 aaKnown RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 UBN1Q9NPG3 1134 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 SIDT1Q9NXL6 827 aaKnown RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 DDX25Q9UHL0 483 aaKnown RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 KCNJ14Q9UNX9 436 aa6.99□□□□□ -1.29
VIM-207ENST00000495528 EP300Q09472 2414 aaPredicted RBP6.99□□□□□ -1.29
VIM-207ENST00000495528 DCHS1Q96JQ0 3298 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 VPS37CA5D8V6 355 aaPredicted RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 ANHXE9PGG2 379 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 NPIPB8E9PQR5 432 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 ASAP2O43150 1006 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 STX6O43752 255 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 TSPAN1O60635 241 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 ERN1O75460 977 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 TUSC2O75896 110 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 GPANK1O95872 356 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 ELANEP08246 267 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 SP9P0CG40 484 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 XBP1P17861 261 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 RPL17P18621 184 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 ZFP36P26651 326 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 YWHABP31946 246 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 RAB1AP62820 205 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 GPC5P78333 572 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 OCA2Q04671 838 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 PPP2R5CQ13362 524 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 GRM3Q14832 879 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms