RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CSNK1G1Q9HCP0 422 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 SPASTQ9UBP0 616 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 SFMBT1Q9UHJ3 866 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 GPR34Q9UPC5 381 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 CEP83Q9Y592 693 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 KCTD3Q9Y597 815 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 ITIH6Q6UXX5 1313 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 CDC14CA4D256 554 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 FAM155BO75949 473 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 PRPF6O94906 941 aaKnown RBP9.12□□□□□ -0.95
GARNL3-219ENST00000495172 KIF20AO95235 890 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 CTSLP07711 333 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 COPB1P53618 953 aaKnown RBP9.12□□□□□ -0.95
GARNL3-219ENST00000495172 RPS24P62847 133 aaKnown RBP9.12□□□□□ -0.95
GARNL3-219ENST00000495172 TNNC1P63316 161 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 ECT2LQ008S8 904 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 ARID5BQ14865 1188 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 BMT2Q1RMZ1 405 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 C14orf28Q4W4Y0 310 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 MIIPQ5JXC2 388 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 TTC38Q5R3I4 469 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 KRT79Q5XKE5 535 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 MYO7BQ6PIF6 2116 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 KYAT3Q6YP21 454 aaKnown RBP9.12□□□□□ -0.95
GARNL3-219ENST00000495172 CLEC20AQ6ZU45 233 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 CXXC5Q7LFL8 322 aaKnown RBP9.12□□□□□ -0.95
GARNL3-219ENST00000495172 KDELC2Q7Z4H8 507 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 SPRED1Q7Z699 444 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 NRSN1Q8IZ57 195 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 KCNN1Q92952 543 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 KIAA1143Q96AT1 154 aaPredicted RBP9.12□□□□□ -0.95
GARNL3-219ENST00000495172 SMR3AQ99954 134 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 SLAMF7Q9NQ25 335 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 SLC39A1Q9NY26 324 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 TBC1D7Q9P0N9 293 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 CROTQ9UKG9 612 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 NEU2Q9Y3R4 380 aa9.12□□□□□ -0.95
GARNL3-219ENST00000495172 R3HCC1Q9Y3T6 440 aaKnown RBP9.12□□□□□ -0.95
GARNL3-219ENST00000495172 IGHV5-10-1A0A0J9YXX1 117 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 SLC7A4O43246 635 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 B4GAT1O43505 415 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 WIPF1O43516 503 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 TNNC2P02585 160 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 RALAP11233 206 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 PGDP52209 483 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 NDST1P52848 882 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 ART1P52961 327 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 PMS2P54278 862 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 OR1D5P58170 312 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 MYL6P60660 151 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 LTBQ06643 244 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 TRIP4Q15650 581 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-219ENST00000495172 TMEM259Q4ZIN3 620 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 FAXCQ5TGI0 409 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 PIK3R6Q5UE93 754 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 Q6ZVU0 165 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 TRAPPC11Q7Z392 1133 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 FAM129CQ86XR2 697 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 CBWD2Q8IUF1 395 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 NLGN4XQ8N0W4 816 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 NECAB1Q8N987 351 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 NLGN4YQ8NFZ3 816 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-219ENST00000495172 FRS2Q8WU20 508 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 TMEM159Q96B96 161 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 KLF6Q99612 283 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-219ENST00000495172 FGFBP2Q9BYJ0 223 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 SPRY4Q9C004 299 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 INTS2Q9H0H0 1204 aaKnown RBP9.11□□□□□ -0.95
GARNL3-219ENST00000495172 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 PARVGQ9HBI0 331 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 APMAPQ9HDC9 416 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 TMEM9Q9P0T7 183 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 DOLKQ9UPQ8 538 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 NTNG1Q9Y2I2 539 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 PCDHGB6Q9Y5F9 930 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 PCDHGA3Q9Y5H0 932 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 ZGRF1Q86YA3 2104 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 CUBNO60494 3623 aa9.11□□□□□ -0.95
GARNL3-219ENST00000495172 MXRA5Q9NR99 2828 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 CAPN5O15484 640 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-219ENST00000495172 F9P00740 461 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 ASLP04424 464 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 HOXB1P14653 301 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-219ENST00000495172 FECHP22830 423 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 KIF11P52732 1056 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 ZNF131P52739 623 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 SKOR2Q2VWA4 1001 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-219ENST00000495172 KMT5BQ4FZB7 885 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 FAM133BQ5BKY9 247 aaKnown RBP9.1□□□□□ -0.95
GARNL3-219ENST00000495172 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 NKAIN2Q5VXU1 208 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 SLC6A19Q695T7 634 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 NADSYN1Q6IA69 706 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 RD3Q7Z3Z2 195 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 RBMXL3Q8N7X1 1067 aaKnown RBP9.1□□□□□ -0.95
GARNL3-219ENST00000495172 FIBINQ8TAL6 211 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 TSACCQ96A04 125 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-219ENST00000495172 SPAG5Q96R06 1193 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 SLC17A9Q9BYT1 436 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms