RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 KPNA3O00505 521 aaPredicted RBP10.84□□□□□ -0.67
NELFE-213ENST00000494956 DDX3XO00571 662 aaKnown RBP eCLIP10.84□□□□□ -0.674e-20■■■■■ 76.5
NELFE-213ENST00000494956 PLRG1O43660 514 aaKnown RBP10.84□□□□□ -0.67
NELFE-213ENST00000494956 CREB3O43889 395 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 CBFA2T3O75081 653 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 LEFTY1O75610 366 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 SERPINC1P01008 464 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 CTSKP43235 329 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 SERPINH1P50454 418 aaKnown RBP10.84□□□□□ -0.67
NELFE-213ENST00000494956 ZNF143P52747 638 aaPredicted RBP10.84□□□□□ -0.67
NELFE-213ENST00000494956 SHC2P98077 582 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 NR1I3Q14994 352 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 TEAD4Q15561 434 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 ASIC2Q16515 512 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 CA9Q16790 459 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 ARSIQ5FYB1 569 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 PIP5KL1Q5T9C9 394 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 SFMBT2Q5VUG0 894 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 SLFN11Q7Z7L1 901 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 DSG4Q86SJ6 1040 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 SLCO6A1Q86UG4 719 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 GATAD2AQ86YP4 633 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 ARFGAP1Q8N6T3 406 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 OR6K2Q8NGY2 324 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 ARHGEF2Q92974 986 aaKnown RBP10.84□□□□□ -0.67
NELFE-213ENST00000494956 FAM131CQ96AQ9 280 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D31Q96DN5 1066 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 SERAC1Q96JX3 654 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 TTYH3Q9C0H2 523 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 OSBPL2Q9H1P3 480 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 NOL6Q9H6R4 1146 aaKnown RBP10.84□□□□□ -0.67
NELFE-213ENST00000494956 TMEM248Q9NWD8 314 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 PCOLCE2Q9UKZ9 415 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 FZD10Q9ULW2 581 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 WASF2Q9Y6W5 498 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 TDRD6O60522 2096 aaKnown RBP10.84□□□□□ -0.67
NELFE-213ENST00000494956 PLXNB3Q9ULL4 1909 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 TPRP12270 2363 aaKnown RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 PTPRBP23467 1997 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 GOLGA8CPA6NN73 597 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 ALOX15BO15296 676 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 RNGTTO60942 597 aaKnown RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 KRT37O76014 449 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 PRLRP16471 622 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 RHOQP17081 205 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 CD38P28907 300 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 CCR5P51681 352 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 C21orf59P57076 290 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 RACK1P63244 317 aaKnown RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 FANCCQ00597 558 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 NRG1Q02297 640 aaPredicted RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 SFSWAPQ12872 951 aaKnown RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 SLC14A1Q13336 389 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 MAMLD1Q13495 774 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 SHBQ15464 509 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 KLHL40Q2TBA0 621 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 FILIP1LQ4L180 1135 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 ATXN7L2Q5T6C5 722 aaPredicted RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 FAM46CQ5VWP2 391 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 DCUN1D2Q6PH85 259 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 IL27RAQ6UWB1 636 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 MARCH9Q86YJ5 346 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 RHBDD1Q8TEB9 315 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 NTAN1Q96AB6 310 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 VOPP1Q96AW1 172 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 PEBP4Q96S96 227 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 ACE2Q9BYF1 805 aaPredicted RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 ZDHHC6Q9H6R6 413 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 OSGEPQ9NPF4 335 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 FZD3Q9NPG1 666 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 IL36AQ9UHA7 158 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 PCDHB9Q9Y5E1 797 aa10.83□□□□□ -0.68
NELFE-213ENST00000494956 MAP1BP46821 2468 aaKnown RBP10.83□□□□□ -0.68
NELFE-213ENST00000494956 TRPM6Q9BX84 2022 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 A0A1W2PQC6 194 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 VILLO15195 856 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 SLC31A1O15431 190 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 LATO43561 262 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 FTLP02792 175 aaPredicted RBP10.82□□□□□ -0.68
NELFE-213ENST00000494956 ATXN1LP0C7T5 689 aaKnown RBP10.82□□□□□ -0.68
NELFE-213ENST00000494956 PSMA2P25787 234 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 EPHB2P29323 1055 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 CCNHP51946 323 aaPredicted RBP10.82□□□□□ -0.68
NELFE-213ENST00000494956 KLHL30Q0D2K2 578 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 SCAPQ12770 1279 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 BNIP3Q12983 259 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 ST3GAL2Q16842 350 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 ZNF423Q2M1K9 1284 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 CARD16Q5EG05 197 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 LRRC73Q5JTD7 316 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 SEL1L3Q68CR1 1132 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 PLEKHA7Q6IQ23 1121 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 RETSATQ6NUM9 610 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 ZNF783Q6ZMS7 281 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 KDM7AQ6ZMT4 941 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 DBX2Q6ZNG2 339 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 TMC6Q7Z403 805 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 SPATS2Q86XZ4 545 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms