RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SRGAP2O75044 1071 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 HNRNPA2B1P22626 353 aaKnown RBP23.74■■□□□ 1.39
COL27A1-208ENST00000494780 SLC20A2Q08357 652 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 RTP5Q14D33 572 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 ARSIQ5FYB1 569 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 ARTNQ5T4W7 220 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 TAF3Q5VWG9 929 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 RETSATQ6NUM9 610 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 ARCQ7LC44 396 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 SLC25A45Q8N413 288 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 OR7D4Q8NG98 312 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 FAM174AQ8TBP5 190 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 GRIN3AQ8TCU5 1115 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 MYOCQ99972 504 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 ZYG11BQ9C0D3 744 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 TNKS2Q9H2K2 1166 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 CLSTN2Q9H4D0 955 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 ZNF212Q9UDV6 495 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 DACH1Q9UI36 760 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 TMEM59LQ9UK28 342 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 AK5Q9Y6K8 562 aa23.74■■□□□ 1.39
COL27A1-208ENST00000494780 FASNP49327 2511 aaKnown RBP23.74■■□□□ 1.39
COL27A1-208ENST00000494780 GOLGA8SH3BPF8 625 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 TRIM38O00635 465 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 SIGLEC6O43699 453 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 PCDH8O95206 1070 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 UCHL3P15374 230 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 GLDCP23378 1020 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 DGKAP23743 735 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 DPCR1Q3MIW9 517 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 HS1BP3Q53T59 392 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 TRNP1Q6NT89 227 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 DPY19L3Q6ZPD9 716 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 DCBLD2Q96PD2 775 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 SPON2Q9BUD6 331 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 STK33Q9BYT3 514 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 ZFR2Q9UPR6 939 aaKnown RBP23.73■■□□□ 1.39
COL27A1-208ENST00000494780 WASF2Q9Y6W5 498 aa23.73■■□□□ 1.39
COL27A1-208ENST00000494780 RNF103O00237 685 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 ZNF821O75541 412 aaPredicted RBP23.72■■□□□ 1.39
COL27A1-208ENST00000494780 LEFTY1O75610 366 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 ZMPSTE24O75844 475 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 ABCG1P45844 678 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 SERPINH1P50454 418 aaKnown RBP23.72■■□□□ 1.39
COL27A1-208ENST00000494780 NEK3P51956 506 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 E2F1Q01094 437 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 C2CD6Q53TS8 623 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 HSP90AA4PQ58FG1 418 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 ABI3BPQ7Z7G0 1075 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 NOP9Q86U38 636 aaKnown RBP23.72■■□□□ 1.39
COL27A1-208ENST00000494780 PCDH20Q8N6Y1 951 aaKnown RBP23.72■■□□□ 1.39
COL27A1-208ENST00000494780 OR13H1Q8NG92 308 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 OR4C6Q8NH72 309 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 CFAP57Q96MR6 1250 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 ATP13A1Q9HD20 1204 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 FZD3Q9NPG1 666 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 PPARGC1AQ9UBK2 798 aaKnown RBP23.72■■□□□ 1.39
COL27A1-208ENST00000494780 CLCA2Q9UQC9 943 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 CELSR3Q9NYQ7 3312 aa23.72■■□□□ 1.39
COL27A1-208ENST00000494780 DOCK4Q8N1I0 1966 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 PES1O00541 588 aaKnown RBP23.71■■□□□ 1.39
COL27A1-208ENST00000494780 ENDOD1O94919 500 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 NOMO3P69849 1222 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 INSM1Q01101 510 aaPredicted RBP23.71■■□□□ 1.39
COL27A1-208ENST00000494780 SEMG2Q02383 582 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 GNA12Q03113 381 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 TMEM259Q4ZIN3 620 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 GCNT7Q6ZNI0 430 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 FAM131BQ86XD5 332 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 DCP2Q8IU60 420 aaKnown RBP23.71■■□□□ 1.39
COL27A1-208ENST00000494780 IFT43Q96FT9 208 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 HEPHQ9BQS7 1158 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 CALN1Q9BXU9 219 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 HS3ST3A1Q9Y663 406 aa23.71■■□□□ 1.39
COL27A1-208ENST00000494780 CXorf51AA0A1B0GTR3 108 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 F8VZ95 297 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 PIAS2O75928 621 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 MMEP08473 750 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 ITGB7P26010 798 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 EIF2S3P41091 472 aaKnown RBP23.7■■□□□ 1.38
COL27A1-208ENST00000494780 DAB2P98082 770 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 CARD16Q5EG05 197 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 NAA35Q5VZE5 725 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 SEL1L3Q68CR1 1132 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 KIAA1161Q6NSJ0 714 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 ZNF677Q86XU0 584 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 DCBLD1Q8N8Z6 715 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 EPS8L1Q8TE68 723 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 CPA5Q8WXQ8 436 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 UCKL1Q9NWZ5 548 aa23.7■■□□□ 1.38
COL27A1-208ENST00000494780 FAM170AA1A519 330 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 A6NNZ2 444 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 TLX3O43711 291 aaPredicted RBP23.69■■□□□ 1.38
COL27A1-208ENST00000494780 ADRB3P13945 408 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 EEF1GP26641 437 aaKnown RBP23.69■■□□□ 1.38
COL27A1-208ENST00000494780 L1CAMP32004 1257 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 CLDN2P57739 230 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 RPS21P63220 83 aaKnown RBP23.69■■□□□ 1.38
COL27A1-208ENST00000494780 ARF5P84085 180 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 CT47A1Q5JQC4 288 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms