RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 IL10RBQ08334 325 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 VEPH1Q14D04 833 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 MARC1Q5VT66 337 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 RASSF3Q86WH2 238 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 PGBD5Q8N414 524 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 OR52K2Q8NGK3 314 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 PABPC5Q96DU9 382 aaKnown RBP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 NT5MQ9NPB1 228 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 ZFATQ9P243 1243 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 ZFP37Q9Y6Q3 630 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 PMPCBO75439 489 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 MMP2P08253 660 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 NMBRP28336 390 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 CORO1AP31146 461 aaKnown RBP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 MAXP61244 160 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 SF3A3Q12874 501 aaKnown RBP eCLIP16.8■□□□□ 0.289e-7■■■□□ 19.2
ATG4B-225ENST00000494465 IFT88Q13099 833 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 DNAJC3Q13217 504 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 TAF12Q16514 161 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 SRLQ86TD4 932 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 CCDC197Q8NCU1 140 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 ZFRQ96KR1 1074 aaKnown RBP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 SRPK1Q96SB4 655 aaKnown RBP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 PDFQ9HBH1 243 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 ENTPD7Q9NQZ7 604 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 ANKRD65E5RJM6 399 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 F11P03951 625 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 ALADP13716 330 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 ELF1P32519 619 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 PPP3CCP48454 512 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 SGSHP51688 502 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 RPS24P62847 133 aaKnown RBP16.79■□□□□ 0.28
ATG4B-225ENST00000494465 MPP3Q13368 585 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 CCDC117Q8IWD4 279 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-225ENST00000494465 TADA1Q96BN2 335 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 CABS1Q96KC9 395 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 FAM111AQ96PZ2 611 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 IL21Q9HBE4 155 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 MAFFQ9ULX9 164 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 RRP15Q9Y3B9 282 aaKnown RBP16.79■□□□□ 0.28
ATG4B-225ENST00000494465 PCDHB12Q9Y5F1 795 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 A0A0D9SEW6 157 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 COPEO14579 308 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 PRAMEF11O60813 436 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 ALDOAP04075 364 aaKnown RBP16.79■□□□□ 0.28
ATG4B-225ENST00000494465 CNPP09543 421 aaKnown RBP16.79■□□□□ 0.28
ATG4B-225ENST00000494465 SPATA31D3P0C874 917 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 CTSAP10619 480 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 WNT3AP56704 352 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 TEDDM1Q5T9Z0 273 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 SPATA31D4Q6ZUB0 917 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 MICALCLQ6ZW33 695 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 ZNF75CPQ92670 426 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-225ENST00000494465 AGAP2Q99490 1192 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 VPS11Q9H270 941 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 RETREG1Q9H6L5 497 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 ATP13A1Q9HD20 1204 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 SLCO1B3Q9NPD5 702 aa16.79■□□□□ 0.28
ATG4B-225ENST00000494465 AGO1Q9UL18 857 aaKnown RBP16.79■□□□□ 0.28
ATG4B-225ENST00000494465 NEBLO76041 1014 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 ITGA2BP08514 1039 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 HOXD9P28356 352 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-225ENST00000494465 GP5P40197 560 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 CHRNA4P43681 627 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 EPHB3P54753 998 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 DSC2Q02487 901 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 ITIH4Q14624 930 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 PCID2Q5JVF3 399 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 PKN3Q6P5Z2 889 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 FAM47EQ6ZV65 393 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
ATG4B-225ENST00000494465 ARRDC2Q8TBH0 407 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
ATG4B-225ENST00000494465 SLC22A12Q96S37 553 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 CPNE1Q99829 537 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 MCMBPQ9BTE3 642 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 FSD1LQ9BXM9 530 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 ARNT2Q9HBZ2 717 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 PLLPQ9Y342 182 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 ZBBXA8MT70 800 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 TGM5O43548 720 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 CDH4P55283 916 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 POU6F1Q14863 301 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 HSP90AA5PQ58FG0 334 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 UBE2Q1Q7Z7E8 422 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 ZNF354CQ86Y25 554 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 ATXN3LQ9H3M9 355 aa16.78■□□□□ 0.28
ATG4B-225ENST00000494465 CXXC1Q9P0U4 656 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-225ENST00000494465 UXTQ9UBK9 157 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-225ENST00000494465 CD86P42081 329 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 NUMBP49757 651 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 LBRQ14739 615 aaKnown RBP16.77■□□□□ 0.28
ATG4B-225ENST00000494465 SEPT7Q16181 437 aaKnown RBP16.77■□□□□ 0.28
ATG4B-225ENST00000494465 ADGRF1Q5T601 910 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 POTEHQ6S545 545 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 KDELC2Q7Z4H8 507 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 KCNMB4Q86W47 210 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 FIBCD1Q8N539 461 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms