RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 EIF3CLB5ME19 914 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 C10orf142B7Z368 130 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 MEN1O00255 615 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 SYNCRIPO60506 623 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 SIN3BO75182 1162 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF217O75362 1048 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 RNF8O76064 485 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 CD160O95971 181 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 MT-CO1P00395 513 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 RETP07949 1114 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 SRCP12931 536 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 VAV1P15498 845 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 HTR7P34969 479 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ACVRL1P37023 503 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ST8SIA6P61647 398 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 RPS14P62263 151 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 SLC25A11Q02978 314 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 GNA12Q03113 381 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 PIGHQ14442 188 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 C6orf118Q5T5N4 469 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 TXNRD3NBQ6F5E7 133 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 C11orf74Q86VG3 221 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 CPNE8Q86YQ8 564 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 RTL3Q8N8U3 475 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF564Q8TBZ8 553 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ARHGEF2Q92974 986 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 SIPA1Q96FS4 1042 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 SPACA7Q96KW9 195 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 PPP1R9BQ96SB3 815 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 FAM129BQ96TA1 746 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 EIF3CQ99613 913 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 NCAPGQ9BPX3 1015 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 C2orf49Q9BVC5 232 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 KLC2Q9H0B6 622 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 MUC3BQ9H195 1237 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF395Q9H8N7 513 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 PARD6AQ9NPB6 346 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 SPTLC3Q9NUV7 552 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 ZNHIT6Q9NWK9 470 aaKnown RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 WSB2Q9NYS7 404 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 UVRAGQ9P2Y5 699 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 PCSK1NQ9UHG2 260 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 RAB23Q9ULC3 237 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 USP18Q9UMW8 372 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 EP300Q09472 2414 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-217ENST00000494395 GVINP1Q7Z2Y8 2422 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 CFAP54Q96N23 3096 aa8.96□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF292O60281 2723 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 BCLAF3A2AJT9 711 aaKnown RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 CREB3O43889 395 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 AKR1B10O60218 316 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PRPSAP2O60256 369 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 LRP3O75074 770 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 ZNF821O75541 412 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 MTA2O94776 668 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 LCA5LO95447 670 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 H2AFZP0C0S5 128 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 DESP17661 470 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 EPHB2P29323 1055 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 CDC25BP30305 580 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 TPMTP51580 245 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 KRT83P78385 493 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 ARF5P84085 180 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 ZBTB16Q05516 673 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 ZNF211Q13398 564 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 BYSLQ13895 437 aaKnown RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 DPYSQ14117 519 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 TCEAL1Q15170 157 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 DLG2Q15700 870 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 ELF2Q15723 593 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 DPYSL2Q16555 572 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 SPDYCQ5MJ68 293 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PEAR1Q5VY43 1037 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 ZNF776Q68DI1 518 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 RWDD4Q6NW29 188 aaKnown RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 KIAA1324Q6UXG2 1013 aaKnown RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 H2AFVQ71UI9 128 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 TMEM139Q8IV31 216 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 SLC41A1Q8IVJ1 513 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 UMODL1-AS1Q8N2C9 162 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PGBD3Q8N328 593 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 MEIOBQ8N635 442 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 FAM71BQ8TC56 605 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 TEKT4Q8WW24 435 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 CTNNBL1Q8WYA6 563 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PRCCQ92733 491 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-217ENST00000494395 COL26A1Q96A83 441 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 FAM131CQ96AQ9 280 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 VOPP1Q96AW1 172 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 CCDC42Q96M95 316 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PANX2Q96RD6 677 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 MAGEH1Q9H213 219 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 DEF6Q9H4E7 631 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 OSGEPQ9NPF4 335 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 NCDNQ9UBB6 729 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 EGFL7Q9UHF1 273 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 IP6K2Q9UHH9 426 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 DNAI1Q9UI46 699 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms