RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TMIEQ8NEW7 156 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 GRIN3AQ8TCU5 1115 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 FAM172AQ8WUF8 416 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 ELF4Q99607 663 aaPredicted RBP9.97□□□□□ -0.81
UFD1-210ENST00000494054 KDM4CQ9H3R0 1056 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 ATP13A1Q9HD20 1204 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 SEPT11Q9NVA2 429 aaKnown RBP9.97□□□□□ -0.81
UFD1-210ENST00000494054 DNAI1Q9UI46 699 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 ZMIZ1Q9ULJ6 1067 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 APOBEC2Q9Y235 224 aaKnown RBP9.97□□□□□ -0.81
UFD1-210ENST00000494054 CA5BQ9Y2D0 317 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 FCF1Q9Y324 198 aaKnown RBP9.97□□□□□ -0.81
UFD1-210ENST00000494054 WASF2Q9Y6W5 498 aa9.97□□□□□ -0.81
UFD1-210ENST00000494054 DOCK9Q9BZ29 2069 aa9.96□□□□□ -0.81
UFD1-210ENST00000494054 SIGLEC16A6NMB1 481 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 GOLGA8CPA6NN73 597 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 TLR4O00206 839 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 RNGTTO60942 597 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 LEFTY1O75610 366 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 DKK1O94907 266 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 CAPNS1P04632 268 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 CALB1P05937 261 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 PLEKP08567 350 aaPredicted RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 RHOQP17081 205 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 GRK6P43250 576 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 SERPINH1P50454 418 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 NXPH1P58417 271 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 RPL7AP62424 266 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 C1QBPQ07021 282 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 SLC20A2Q08357 652 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 BNIP3Q12983 259 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 RETSATQ6NUM9 610 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 RWDD4Q6NW29 188 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 TRIM69Q86WT6 500 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 MARCH9Q86YJ5 346 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 PYROXD2Q8N2H3 581 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 MFSD2AQ8NA29 543 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 C3orf20Q8ND61 904 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 SAP25Q8TEE9 199 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 BAP1Q92560 729 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 KLK6Q92876 244 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 ARHGEF2Q92974 986 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 NTAN1Q96AB6 310 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 VOPP1Q96AW1 172 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 SKA1Q96BD8 255 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 CDC6Q99741 560 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 SYT11Q9BT88 431 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 SELENOOQ9BVL4 669 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 RTN4Q9NQC3 1192 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 GDF3Q9NR23 364 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 TMEM248Q9NWD8 314 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 TAS2R14Q9NYV8 317 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 IL36AQ9UHA7 158 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 TPX2Q9ULW0 747 aaKnown RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
UFD1-210ENST00000494054 FRYQ5TBA9 3013 aa9.96□□□□□ -0.82
UFD1-210ENST00000494054 A0A1W2PQU0 124 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 SLC31A1O15431 190 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 CCP110O43303 1012 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 DFNA5O60443 496 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 PRNPP04156 253 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 PRLRP16471 622 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 FERP16591 822 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 EPHA8P29322 1005 aaPredicted RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 GKP32189 559 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 DNA2P51530 1060 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 ZNF143P52747 638 aaPredicted RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 OGDHQ02218 1023 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 STAT4Q14765 748 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 ZNF284Q2VY69 593 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 CARD16Q5EG05 197 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 ACAD10Q6JQN1 1059 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 DNAJC24Q6P3W2 148 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 SCYL2Q6P3W7 929 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 CCNI2Q6ZMN8 369 aaPredicted RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 LEKR1Q6ZMV7 388 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 ERN2Q76MJ5 926 aaKnown RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 SLFN11Q7Z7L1 901 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 DNAAF5Q86Y56 855 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 MCOLN2Q8IZK6 566 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 ZCCHC14Q8WYQ9 949 aaKnown RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 TBC1D31Q96DN5 1066 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 CCDC114Q96M63 670 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 NAP1L5Q96NT1 182 aaPredicted RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 MCEEQ96PE7 176 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 MYOCQ99972 504 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 BPIFA3Q9BQP9 254 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 HDAC8Q9BY41 377 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 CEP44Q9C0F1 390 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 NOL6Q9H6R4 1146 aaKnown RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 CAAP1Q9H8G2 361 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 PREBQ9HCU5 417 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 ZFR2Q9UPR6 939 aaKnown RBP9.95□□□□□ -0.82
UFD1-210ENST00000494054 DMTF1Q9Y222 760 aa9.95□□□□□ -0.82
UFD1-210ENST00000494054 TP53BP1Q12888 1972 aaPredicted RBP9.94□□□□□ -0.82
UFD1-210ENST00000494054 PLXNB3Q9ULL4 1909 aa9.94□□□□□ -0.82
UFD1-210ENST00000494054 TMEM8BA6NDV4 472 aa9.94□□□□□ -0.82
UFD1-210ENST00000494054 TMCO5BA8MYB1 307 aa9.94□□□□□ -0.82
UFD1-210ENST00000494054 PRAMEF26H0Y7S4 382 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms