RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 GEMIN4P57678 1058 aaKnown RBP11.61□□□□□ -0.55
MCF2L-231ENST00000494043 VSNL1P62760 191 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 TFF2Q03403 129 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 CALCOCO2Q13137 446 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 ZNF235Q14590 738 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 PARP6Q2NL67 630 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 RNASEH2BQ5TBB1 312 aaKnown RBP11.61□□□□□ -0.55
MCF2L-231ENST00000494043 IZUMO3Q5VZ72 239 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 LINGO4Q6UY18 593 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 PID1Q7Z2X4 250 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 ADIPOR2Q86V24 386 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 TAB3Q8N5C8 712 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-231ENST00000494043 BBOF1Q8ND07 529 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 TTC8Q8TAM2 541 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 IFT81Q8WYA0 676 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 AGAP3Q96P47 875 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 PARD6BQ9BYG5 372 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 PRDM6Q9NQX0 595 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 DEC1Q9P2X7 70 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 SEPT3Q9UH03 358 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 RSPH14Q9UHP6 348 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 RAB21Q9UL25 225 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 ATP8A1Q9Y2Q0 1164 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 ACTL7AQ9Y615 435 aa11.61□□□□□ -0.55
MCF2L-231ENST00000494043 SPTBN5Q9NRC6 3674 aaKnown RBP11.61□□□□□ -0.55
MCF2L-231ENST00000494043 MYOFQ9NZM1 2061 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 SHROOM3Q8TF72 1996 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 LOC730098B7Z3J9 87 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 TMCC1O94876 653 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 ITIH2P19823 946 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 MCM3P25205 808 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 PSMB4P28070 264 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 OPRD1P41143 372 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 EIF2DP41214 584 aaKnown RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 CTSOP43234 321 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 MAGEA6P43360 314 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 CARSP49589 748 aaKnown RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 SERPINH1P50454 418 aaKnown RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 ITGA8P53708 1063 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 BASP1P80723 227 aaKnown RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 KDSRQ06136 332 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 SULT2A1Q06520 285 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 SEMA5AQ13591 1074 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 GEN1Q17RS7 908 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 INO80DQ53TQ3 878 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 FAXCQ5TGI0 409 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 MBLAC2Q68D91 279 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 ZDHHC24Q6UX98 284 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 PCGF5Q86SE9 256 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 BBS5Q8N3I7 341 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 PHTF2Q8N3S3 785 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 PGBD5Q8N414 524 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 SLC44A3Q8N4M1 653 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 EIF1ADQ8N9N8 165 aaKnown RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 CSGALNACT1Q8TDX6 532 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 CPT1BQ92523 772 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 ART4Q93070 314 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 TTC17Q96AE7 1141 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 CHFRQ96EP1 664 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 PSKH2Q96QS6 385 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 GORASP1Q9BQQ3 440 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 CINPQ9BW66 212 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 FAM129AQ9BZQ8 928 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 ETNK1Q9HBU6 452 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 GLOD4Q9HC38 313 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 NT5MQ9NPB1 228 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 TRPV5Q9NQA5 729 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 ZDHHC18Q9NUE0 388 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 HAUS2Q9NVX0 235 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 TPX2Q9ULW0 747 aaKnown RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-231ENST00000494043 TTLL3Q9Y4R7 772 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 KIAA1549LQ6ZVL6 1849 aa11.6□□□□□ -0.55
MCF2L-231ENST00000494043 F5H423 210 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 MUSKO15146 869 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 TP73O15350 636 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 MT-CO1P00395 513 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 ASLP04424 464 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 ASGR2P07307 311 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 POLR2EP19388 210 aaKnown RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 ECHS1P30084 290 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 HSPA9P38646 679 aaKnown RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 PLTPP55058 493 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 ECT2LQ008S8 904 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 CAV1Q03135 178 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 SLC20A2Q08357 652 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 MESP2Q0VG99 397 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 HLTFQ14527 1009 aaKnown RBP eCLIP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 KCNJ11Q14654 390 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 MORF4L2Q15014 288 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 CYTH1Q15438 398 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 TMEM215Q68D42 235 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 NAIF1Q69YI7 327 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 ALG1LQ6GMV1 187 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 HIBCHQ6NVY1 386 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 METTL3Q86U44 580 aaKnown RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 HOOK3Q86VS8 718 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms