RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 TPSAB1Q15661 275 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 KIZQ2M2Z5 673 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 C6orf10Q5SRN2 563 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SWSAP1Q6NVH7 229 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CAMK1DQ8IU85 385 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 PBXIP1Q96AQ6 731 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 ANKRD36BP1Q96IX9 119 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 TAAR1Q96RJ0 339 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 UHRF1Q96T88 793 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 OLFM1Q99784 485 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CCDC167Q9P0B6 97 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SEPT9Q9UHD8 586 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 AP4E1Q9UPM8 1137 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 TCAF1Q9Y4C2 921 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 K7ERI5 159 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 TRIM24O15164 1050 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 C2P06681 752 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 PROZP22891 400 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 EEF1B2P24534 225 aaKnown RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 PTPN9P43378 593 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 ZNF143P52747 638 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 NSUN2Q08J23 767 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 HERC3Q15034 1050 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SLC36A3Q495N2 470 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SMUG1Q53HV7 270 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 PIWIL3Q7Z3Z3 882 aaKnown RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 STRA8Q7Z7C7 330 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 ZBTB33Q86T24 672 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SAPCD2Q86UD0 394 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 Q8N9G6 341 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CHURC1Q8WUH1 139 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SREK1Q8WXA9 508 aaKnown RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 MROQ9BYG7 248 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SYBUQ9NX95 663 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 B3GNT3Q9Y2A9 372 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 GCATO75600 419 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 HPCAL1P37235 193 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 HSD17B4P51659 736 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 INAQ16352 499 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 CARTPTQ16568 116 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 DGKDQ16760 1214 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 PIGZQ86VD9 579 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 GABPB2Q8TAK5 448 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 UBA3Q8TBC4 463 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 GLT1D1Q96MS3 346 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 FANCEQ9HB96 536 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 PCDH12Q9NPG4 1184 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 CACNA2D2Q9NY47 1150 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 TRAF6Q9Y4K3 522 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 SLC22A2O15244 555 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 TGM2P21980 687 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 GARSP41250 739 aaKnown RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 JAK3P52333 1124 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 TPTEP56180 551 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 CAMK2BQ13554 666 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 LRP8Q14114 963 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 MTERF2Q49AM1 385 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 VASH1Q7L8A9 365 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 ERMP1Q7Z2K6 904 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 DHFR2Q86XF0 187 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 MFSD2AQ8NA29 543 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 FCRL3Q96P31 734 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 CTRCQ99895 268 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 ACE2Q9BYF1 805 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 UNKQ9C0B0 810 aaKnown RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 VPS33BQ9H267 617 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 TASP1Q9H6P5 420 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 SCHIP1Q9P0W5 487 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 OAZ3Q9UMX2 235 aa11.86□□□□□ -0.51
HDAC4-210ENST00000493582 COL16A1Q07092 1604 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-210ENST00000493582 IQCA1LA6NCM1 817 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 G3V3G9 751 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 DGAT1O75907 488 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 BBOX1O75936 387 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 GPD1P21695 349 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 ADSLP30566 484 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-210ENST00000493582 TFAMQ00059 246 aaKnown RBP11.85□□□□□ -0.51
HDAC4-210ENST00000493582 IFITM3Q01628 133 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 TIGD2Q4W5G0 525 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 TBCELQ5QJ74 424 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 FAM219BQ5XKK7 198 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 ABRAXAS1Q6UWZ7 409 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 DSG4Q86SJ6 1040 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 NAT16Q8N8M0 369 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 ABHD11Q8NFV4 315 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 HMGCLL1Q8TB92 370 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
HDAC4-210ENST00000493582 SNX19Q92543 992 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 CERS2Q96G23 380 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 TSPAN18Q96SJ8 248 aa11.85□□□□□ -0.51
HDAC4-210ENST00000493582 CNPY3Q9BT09 278 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms