RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 IRF2BPLQ9H1B7 796 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 RSPH9Q9H1X1 276 aaPredicted RBP17.17■□□□□ 0.34
RER1-208ENST00000493207 FBRSQ9HAH7 460 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 FAM86C1Q9NVL1 165 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 IPO11Q9UI26 975 aaKnown RBP17.17■□□□□ 0.34
RER1-208ENST00000493207 PCDHGA2Q9Y5H1 932 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 R4GN57 208 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 hCG_1818297A0A087WSY0 165 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 MIF4GDA9UHW6 222 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 DDX3YO15523 660 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 ZSCAN12O43309 604 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 RNASEH1O60930 286 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 ZFXP17010 805 aaPredicted RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 IL10RBQ08334 325 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 GALNT2Q10471 571 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 SLC10A2Q12908 348 aaPredicted RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 SRSF5Q13243 272 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 ELAVL3Q14576 367 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 ZNF776Q68DI1 518 aaPredicted RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 ZC3H14Q6PJT7 736 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 NPNTQ6UXI9 565 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 METTL3Q86U44 580 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 MMAAQ8IVH4 418 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 REXO1L1PQ8IX06 675 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 PCDH20Q8N6Y1 951 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 OR2A12Q8NGT7 310 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 CASKIN2Q8WXE0 1202 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 RLN3Q8WXF3 142 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 OR8D1Q8WZ84 308 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 HES6Q96HZ4 224 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 CCDC114Q96M63 670 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 FAM129BQ96TA1 746 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 TM6SF2Q9BZW4 377 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 TRMT1Q9NXH9 659 aaKnown RBP17.16■□□□□ 0.34
RER1-208ENST00000493207 INVSQ9Y283 1065 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 HEY1Q9Y5J3 304 aa17.16■□□□□ 0.34
RER1-208ENST00000493207 PLXND1Q9Y4D7 1925 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 MAFKO60675 156 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 CST8O60676 142 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 ACADMP11310 421 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 GARSP41250 739 aaKnown RBP17.15■□□□□ 0.34
RER1-208ENST00000493207 RECQLP46063 649 aaPredicted RBP17.15■□□□□ 0.34
RER1-208ENST00000493207 PSMD8P48556 350 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 COPS2P61201 443 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 RPS14P62263 151 aaKnown RBP17.15■□□□□ 0.34
RER1-208ENST00000493207 ADCY2Q08462 1091 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 TFDP2Q14188 446 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 CYTH1Q15438 398 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 USP39Q53GS9 565 aaKnown RBP17.15■□□□□ 0.34
RER1-208ENST00000493207 INO80DQ53TQ3 878 aaPredicted RBP17.15■□□□□ 0.34
RER1-208ENST00000493207 ISG20Q96AZ6 181 aaKnown RBP17.15■□□□□ 0.34
RER1-208ENST00000493207 HEMGNQ9BXL5 484 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 CD93Q9NPY3 652 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 DTLQ9NZJ0 730 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 PYCARDQ9ULZ3 195 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 FARP1Q9Y4F1 1045 aaPredicted RBP17.15■□□□□ 0.34
RER1-208ENST00000493207 USP34Q70CQ2 3546 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 VPS13AQ96RL7 3174 aa17.15■□□□□ 0.34
RER1-208ENST00000493207 MYO15AQ9UKN7 3530 aa17.14■□□□□ 0.34
RER1-208ENST00000493207 MCF2LO15068 1137 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 HRO43593 1189 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 LILRB5O75023 590 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 RPP40O75818 363 aaKnown RBP17.14■□□□□ 0.33
RER1-208ENST00000493207 IL1BP01584 269 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 DNTTP04053 509 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 PYGMP11217 842 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 RHOAP61586 193 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
RER1-208ENST00000493207 PPP2R5EQ16537 467 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 CARD16Q5EG05 197 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 ATXN7L2Q5T6C5 722 aaPredicted RBP17.14■□□□□ 0.33
RER1-208ENST00000493207 MEI1Q5TIA1 1274 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 AADACL2Q6P093 401 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 DPY19L3Q6ZPD9 716 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 DSG4Q86SJ6 1040 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 LRRC49Q8IUZ0 686 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 RYBPQ8N488 228 aaPredicted RBP17.14■□□□□ 0.33
RER1-208ENST00000493207 CHST14Q8NCH0 376 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 TRIM58Q8NG06 486 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 LRRN4Q8WUT4 740 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 CYP8B1Q9UNU6 501 aa17.14■□□□□ 0.33
RER1-208ENST00000493207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
RER1-208ENST00000493207 ALOX15BO15296 676 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 MID1O15344 667 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 GSRP00390 522 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 CTSLP07711 333 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 MX2P20592 715 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 CHRNA3P32297 505 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 CETN2P41208 172 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 TPMTP51580 245 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 CCNHP51946 323 aaPredicted RBP17.13■□□□□ 0.33
RER1-208ENST00000493207 SNRPD1P62314 119 aaKnown RBP17.13■□□□□ 0.33
RER1-208ENST00000493207 RFTN1Q14699 578 aaPredicted RBP17.13■□□□□ 0.33
RER1-208ENST00000493207 LBRQ14739 615 aaKnown RBP17.13■□□□□ 0.33
RER1-208ENST00000493207 CST6Q15828 149 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 TMCO4Q5TGY1 634 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 DCAF12L1Q5VU92 463 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 FAM160A2Q8N612 972 aaPredicted RBP17.13■□□□□ 0.33
RER1-208ENST00000493207 FRMD1Q8N878 549 aa17.13■□□□□ 0.33
RER1-208ENST00000493207 CCNYQ8ND76 341 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms