RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KLF6Q99612 283 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 CPNE1Q99829 537 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 DDX50Q9BQ39 737 aaKnown RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 APOL2Q9BQE5 337 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 KIFC1Q9BW19 673 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 KLF16Q9BXK1 252 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 MAGEH1Q9H213 219 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 VPS11Q9H270 941 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 VPS45Q9NRW7 570 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 ZFATQ9P243 1243 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 INSL5Q9Y5Q6 135 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 KIAA0100Q14667 2235 aaKnown RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 ZCWPW2A0A1B0GU75 182 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 HMX2A2RU54 273 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 COPEO14579 308 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 TEX28O15482 410 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 RFPL1O75677 317 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 STC2O76061 302 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 FGBP02675 491 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 CTSAP10619 480 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ALADP13716 330 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 TPH1P17752 444 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 SLC6A4P31645 630 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ITIH4Q14624 930 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 PCID2Q5JVF3 399 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 GRTP1Q5TC63 336 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 DENND5AQ6IQ26 1287 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 POTEHQ6S545 545 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 CES3Q6UWW8 571 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 TMEM92Q6UXU6 159 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 RANBP10Q6VN20 620 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 PACS1Q6VY07 963 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 YTHDF3Q7Z739 585 aaKnown RBP14.27□□□□□ -0.12
PTPN7-216ENST00000492977 CIR1Q86X95 450 aaPredicted RBP14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ZNF354CQ86Y25 554 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 DENND1CQ8IV53 801 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 IPMKQ8NFU5 416 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ACMSDQ8TDX5 336 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 AUTS2Q8WXX7 1259 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 PABPC5Q96DU9 382 aaKnown RBP14.27□□□□□ -0.12
PTPN7-216ENST00000492977 MYEOVQ96EZ4 313 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 IMP4Q96G21 291 aaKnown RBP14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ZNF599Q96NL3 588 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ELAC2Q9BQ52 826 aaKnown RBP14.27□□□□□ -0.12
PTPN7-216ENST00000492977 FICDQ9BVA6 458 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 FSD1LQ9BXM9 530 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 RNF38Q9H0F5 515 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ZBP1Q9H171 429 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ARNT2Q9HBZ2 717 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 FGFR1OP2Q9NVK5 253 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 ASB3Q9Y575 518 aa14.27□□□□□ -0.12
PTPN7-216ENST00000492977 KIAA1671Q9BY89 1806 aa14.27□□□□□ -0.13
PTPN7-216ENST00000492977 ANAPC1Q9H1A4 1944 aa14.27□□□□□ -0.13
PTPN7-216ENST00000492977 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 PRAMEF11O60813 436 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 CLDN11O75508 207 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 DHRS4L1P0CG22 281 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 ERVK-10P10266 1014 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 CORO1AP31146 461 aaKnown RBP14.26□□□□□ -0.13
PTPN7-216ENST00000492977 GP5P40197 560 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 LBX1P52954 281 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 SLC10A7Q0GE19 358 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 ADGRF1Q5T601 910 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 MROH9Q5TGP6 573 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 RFWD3Q6PCD5 774 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPN7-216ENST00000492977 LRRC8CQ8TDW0 803 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 CLP1Q92989 425 aaKnown RBP14.26□□□□□ -0.13
PTPN7-216ENST00000492977 MRGPRX2Q96LB1 330 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 IQCGQ9H095 443 aaKnown RBP14.26□□□□□ -0.13
PTPN7-216ENST00000492977 MRM3Q9HC36 420 aaKnown RBP14.26□□□□□ -0.13
PTPN7-216ENST00000492977 NT5MQ9NPB1 228 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 CHRAC1Q9NRG0 131 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 SLC17A7Q9P2U7 560 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 INSL6Q9Y581 213 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 PTPRSQ13332 1948 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 CHD5Q8TDI0 1954 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 C2orf78A6NCI8 922 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 SNX3O60493 162 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 PMPCBO75439 489 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 LATS1O95835 1130 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 F11P03951 625 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 KLKB1P03952 638 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 LINC00271P0C7V0 271 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 ADRA1DP25100 572 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 ETV4P43268 484 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 WNT3AP56704 352 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 GNA12Q03113 381 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 BMPR2Q13873 1038 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 TMCO4Q5TGY1 634 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 KDELC1Q6UW63 502 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 CHST9Q7L1S5 443 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 TMEM150AQ86TG1 271 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 HOMEZQ8IX15 550 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 CFAP52Q8N1V2 620 aa14.26□□□□□ -0.13
PTPN7-216ENST00000492977 MFSD3Q96ES6 412 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms