RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 TNFSF14O43557 240 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 SRGAP2O75044 1071 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 GJB6O95452 261 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 GNA12Q03113 381 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 SLC20A2Q08357 652 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 SCAPQ12770 1279 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 OVGP1Q12889 678 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 FAM72AQ5TYM5 149 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 FAM72DQ6L9T8 149 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 NEK5Q6P3R8 708 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 SASS6Q6UVJ0 657 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 LRSAM1Q6UWE0 723 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 LINGO4Q6UY18 593 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 PRPF39Q86UA1 669 aaKnown RBP14.37□□□□□ -0.11
ATG3-206ENST00000492886 FAM72BQ86X60 149 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 PLPP6Q8IY26 295 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 CHST14Q8NCH0 376 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 SKA1Q96BD8 255 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 MAGEB5Q9BZ81 275 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 AASDHPPTQ9NRN7 309 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 NDFIP2Q9NV92 336 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 TMEM248Q9NWD8 314 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 OR12D3Q9UGF7 316 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 LRRK1Q38SD2 2015 aa14.37□□□□□ -0.11
ATG3-206ENST00000492886 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
ATG3-206ENST00000492886 FREM2Q5SZK8 3169 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 SRRM3A6NNA2 597 aaPredicted RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 TAF4O00268 1085 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 RNGTTO60942 597 aaKnown RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 PRNPP04156 253 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 RHOQP17081 205 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 EPHA8P29322 1005 aaPredicted RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 SDC4P31431 198 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 RFC1P35251 1148 aaPredicted RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 MAPKAPK2P49137 400 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 IL9RQ01113 521 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 PPP1R15BQ5SWA1 713 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 PRAMEF14Q5SWL7 426 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 SFMBT2Q5VUG0 894 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 RETSATQ6NUM9 610 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 WDR59Q6PJI9 974 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 DPY19L3Q6ZPD9 716 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 PCDH20Q8N6Y1 951 aaKnown RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 CCDC185Q8N715 623 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 C3orf20Q8ND61 904 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 NEK11Q8NG66 645 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 ZCCHC14Q8WYQ9 949 aaKnown RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 CCDC114Q96M63 670 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 HDAC8Q9BY41 377 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 GDF3Q9NR23 364 aa14.36□□□□□ -0.11
ATG3-206ENST00000492886 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
ATG3-206ENST00000492886 ANKRD36A6QL64 1941 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 SIGLEC16A6NMB1 481 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 PRAMEF26H0Y7S4 382 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 CBX4O00257 560 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 LRIG2O94898 1065 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 MBD3O95983 291 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 CALB1P05937 261 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 KRT3P12035 628 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ATP1A3P13637 1013 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 NSFP46459 744 aaKnown RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 UBXN1Q04323 297 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 CAMK2BQ13554 666 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 SMAD1Q15797 465 aaKnown RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 CDO1Q16878 200 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ZNF284Q2VY69 593 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 INAVAQ3KP66 663 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ARL13BQ3SXY8 428 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 POM121L1PQ3SYA9 428 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 TMEM259Q4ZIN3 620 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 SETMARQ53H47 684 aaPredicted RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 SLC45A4Q5BKX6 768 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 CCDC183Q5T5S1 534 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 IRF2BP2Q7Z5L9 587 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 PHLDB2Q86SQ0 1253 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 PROSER1Q86XN7 944 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 GATAD2AQ86YP4 633 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 OXR1Q8N573 874 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ANKRD20A12PQ8NF67 263 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 FAM172AQ8WUF8 416 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ARHGEF2Q92974 986 aaKnown RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 ISG20Q96AZ6 181 aaKnown RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 AGPAT1Q99943 283 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ADAM22Q9P0K1 906 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 TMEM63CQ9P1W3 806 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 IL36AQ9UHA7 158 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 ZFR2Q9UPR6 939 aaKnown RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 DSPP15924 2871 aaKnown RBP14.35□□□□□ -0.11
ATG3-206ENST00000492886 ADAMTS20P59510 1910 aa14.35□□□□□ -0.11
ATG3-206ENST00000492886 KNTC1P50748 2209 aa14.34□□□□□ -0.11
ATG3-206ENST00000492886 APC2O95996 2303 aa14.34□□□□□ -0.11
ATG3-206ENST00000492886 ACACAQ13085 2346 aa14.34□□□□□ -0.11
ATG3-206ENST00000492886 KPNA3O00505 521 aaPredicted RBP14.34□□□□□ -0.11
ATG3-206ENST00000492886 BNIP3LO60238 219 aa14.34□□□□□ -0.11
ATG3-206ENST00000492886 LEFTY1O75610 366 aa14.34□□□□□ -0.11
ATG3-206ENST00000492886 PLEKP08567 350 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms