RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 NUCKS1Q9H1E3 243 aaKnown RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 ANKZF1Q9H8Y5 726 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 B8ZZF3 427 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 OPA1O60313 960 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 RTN2O75298 545 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 LUC7L3O95232 432 aaKnown RBP13.5□□□□□ -0.25
HDAC3-213ENST00000492506 IL1BP01584 269 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 MPOP05164 745 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 SETSIPP0DME0 302 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 LCP1P13796 627 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 STK19P49842 368 aaPredicted RBP13.5□□□□□ -0.25
HDAC3-213ENST00000492506 LIG3P49916 1009 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 MXI1P50539 228 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 UBASH3AP57075 661 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 MYL5Q02045 173 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 OVGP1Q12889 678 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 ADAM9Q13443 819 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 LY6DQ14210 128 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 ELAVL3Q14576 367 aaKnown RBP13.5□□□□□ -0.25
HDAC3-213ENST00000492506 RBBP5Q15291 538 aaKnown RBP13.5□□□□□ -0.25
HDAC3-213ENST00000492506 PDCD2Q16342 344 aaPredicted RBP13.5□□□□□ -0.25
HDAC3-213ENST00000492506 DCAF6Q58WW2 860 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 ARHGAP40Q5TG30 622 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 PMF1Q6P1K2 205 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.5□□□□□ -0.25
HDAC3-213ENST00000492506 PRPF39Q86UA1 669 aaKnown RBP13.5□□□□□ -0.25
HDAC3-213ENST00000492506 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 C3orf20Q8ND61 904 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 ARMC2Q8NEN0 867 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 OR4C6Q8NH72 309 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 RNF217Q8TC41 542 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 CLEC4CQ8WTT0 213 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 SLC35F5Q8WV83 523 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 IRGQQ8WZA9 623 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 SLC39A13Q96H72 371 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 CAAP1Q9H8G2 361 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 ASCL3Q9NQ33 180 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 UCKL1Q9NWZ5 548 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 HESX1Q9UBX0 185 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 SARDHQ9UL12 918 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 MAPK8IP1Q9UQF2 711 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 DMTF1Q9Y222 760 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 CA5BQ9Y2D0 317 aa13.5□□□□□ -0.25
HDAC3-213ENST00000492506 RP1P56715 2156 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 PYCARD-AS1I3L0S3 204 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 PIK3R2O00459 728 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 SLC7A4O43246 635 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 PLRG1O43660 514 aaKnown RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 RHOBTB3O94955 611 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 LTFP02788 710 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 MYL1P05976 194 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 DGKAP23743 735 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 RPL13P26373 211 aaKnown RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 MAT2AP31153 395 aaKnown RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 LSSP48449 732 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 RGS7P49802 495 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 UCNP55089 124 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 APBA1Q02410 837 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CKAP4Q07065 602 aaKnown RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CUL2Q13617 745 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CDH18Q13634 790 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CBWD6Q4V339 395 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CBWD3Q5JTY5 395 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CBWD5Q5RIA9 395 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 FOXR1Q6PIV2 292 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 TRIM69Q86WT6 500 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 FAM181AQ8N9Y4 354 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 FRS2Q8WU20 508 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 TFAP2BQ92481 460 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 N4BP2L2Q92802 583 aaPredicted RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 PANX2Q96RD6 677 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CRACR2AQ9BSW2 395 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 CLMPQ9H6B4 373 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 DACH1Q9UI36 760 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 XPO7Q9UIA9 1087 aaKnown RBP13.49□□□□□ -0.25
HDAC3-213ENST00000492506 COQ4Q9Y3A0 265 aa13.49□□□□□ -0.25
HDAC3-213ENST00000492506 TRPM6Q9BX84 2022 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 LY6G6EA0A0G2JKS1 128 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 A0A1B0GVM2 712 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 MAGEC1O60732 1142 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 VDRP11473 427 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 CKMT1AP12532 417 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 C6P13671 934 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 CD19P15391 556 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 NUDT1P36639 197 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 ERVPABLB-1P60509 514 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 GABREP78334 506 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 SKOR1P84550 965 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 STAT4Q14765 748 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
HDAC3-213ENST00000492506 AGBL4Q5VU57 503 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms