RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 OPHN1O60890 802 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 CES1P23141 567 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 RBL1P28749 1068 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 MAPK8P45983 427 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 SNRPD1P62314 119 aaKnown RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 IFI35P80217 286 aaPredicted RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 DR1Q01658 176 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 STARD3Q14849 445 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 GAB4Q2WGN9 574 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 P3H1Q32P28 736 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 HSF5Q4G112 596 aaPredicted RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 TMEM196Q5HYL7 178 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 ZNF572Q7Z3I7 529 aaPredicted RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 KIAA0907Q7Z7F0 614 aaPredicted RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 DSG4Q86SJ6 1040 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 ADIPOR2Q86V24 386 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 CHPFQ8IZ52 775 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 SIX5Q8N196 739 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 RYBPQ8N488 228 aaPredicted RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 ZNF513Q8N8E2 541 aaPredicted RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 FAM71DQ8N9W8 422 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 NETO2Q8NC67 525 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 OR52K2Q8NGK3 314 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 CHFRQ96EP1 664 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 P2RY11Q96G91 374 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 GDAP1L1Q96MZ0 367 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 KRT12Q99456 494 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 TMEM121Q9BTD3 319 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 CARD6Q9BX69 1037 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 POLR1EQ9GZS1 481 aaKnown RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 RAB17Q9H0T7 212 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 RBM22Q9NW64 420 aaKnown RBP eCLIP11.15□□□□□ -0.62
VARS2-210ENST00000490699 PAK5Q9P286 719 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 SUN2Q9UH99 717 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 MUTYHQ9UIF7 546 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 NDRG2Q9UN36 371 aaKnown RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 ERVW-1Q9UQF0 538 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 HS3ST2Q9Y278 367 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 OR51B4Q9Y5P0 310 aa11.15□□□□□ -0.62
VARS2-210ENST00000490699 TCF20Q9UGU0 1960 aaKnown RBP11.15□□□□□ -0.62
VARS2-210ENST00000490699 SHROOM3Q8TF72 1996 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 A0A0A0MRY4 1105 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 E7EVH7 732 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 J3KR12 359 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 KCNK1O00180 336 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 SYNCRIPO60506 623 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 SNAP91O60641 907 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 TMCC1O94876 653 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 JCHAINP01591 159 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 ALADP13716 330 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 LMAN1P49257 510 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 NUMBP49757 651 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 MRPS21P82921 87 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 ARF5P84085 180 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 GRM3Q14832 879 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 UBXN2BQ14CS0 331 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 SIX1Q15475 284 aaPredicted RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 OASLQ15646 514 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 ARTNQ5T4W7 220 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 CFAP58Q5T655 872 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 LINGO4Q6UY18 593 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 ARHGAP36Q6ZRI8 547 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 PID1Q7Z2X4 250 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 SYNPOQ8N3V7 929 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 SH2D3CQ8N5H7 860 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 ALLCQ8N6M5 410 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 PCDH20Q8N6Y1 951 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 USP33Q8TEY7 942 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 CYB5D2Q8WUJ1 264 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 ISG20Q96AZ6 181 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 ALG14Q96F25 216 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 LMLNQ96KR4 655 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 RPL10LQ96L21 214 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 SPATA13Q96N96 652 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 AGAP3Q96P47 875 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 PCDH9Q9HC56 1237 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 NT5MQ9NPB1 228 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 ASIC3Q9UHC3 531 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 PCYOX1Q9UHG3 505 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 RSPH14Q9UHP6 348 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 INTS6Q9UL03 887 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 UTP11Q9Y3A2 253 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 NYNRINQ9P2P1 1898 aaKnown RBP11.14□□□□□ -0.63
VARS2-210ENST00000490699 COL4A3Q01955 1670 aa11.14□□□□□ -0.63
VARS2-210ENST00000490699 MYO10Q9HD67 2058 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 NUP205Q92621 2012 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 COL4A2P08572 1712 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 EDDM13A0A1B0GTR0 161 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 KANSL1LA0AUZ9 987 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 C5orf60A6NFR6 353 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 PRRT4C9JH25 899 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 PDE2AO00408 941 aaPredicted RBP11.13□□□□□ -0.63
VARS2-210ENST00000490699 TRIM24O15164 1050 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 DCXO43602 365 aa11.13□□□□□ -0.63
VARS2-210ENST00000490699 BNIP3LO60238 219 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms