RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	POLD2	P49005	469 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	FMO5	P49326	533 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	CLCN4	P51793	760 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ARPP19	P56211	112 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	MYL6	P60660	151 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	YWHAE	P62258	255 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	RPL11	P62913	178 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	VAMP2	P63027	116 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	SMARCB1	Q12824	385 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	CDC16	Q13042	620 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	PLD1	Q13393	1074 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	KCNJ12	Q14500	433 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	MYBPC3	Q14896	1274 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	SMAD1	Q15797	465 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	AAK1	Q2M2I8	961 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	SGSM1	Q2NKQ1	1148 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	CBWD6	Q4V339	395 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	CCDC157	Q569K6	752 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	C3orf38	Q5JPI3	329 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	CBWD3	Q5JTY5	395 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	CBWD5	Q5RIA9	395 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	THEMIS2	Q5TEJ8	643 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	WSCD1	Q658N2	575 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	TPGS2	Q68CL5	300 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	SLC30A6	Q6NXT4	461 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	RPUSD3	Q6P087	351 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	CD300LG	Q6UXG3	332 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	UNQ6494/PRO21346	Q6UXR6	183 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	C15orf39	Q6ZRI6	1047 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	TAS1R1	Q7RTX1	841 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	PHYKPL	Q8IUZ5	450 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	LMNTD2	Q8IXW0	634 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	DCP1B	Q8IZD4	617 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ADGRG2	Q8IZP9	1017 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	TMEM130	Q8N3G9	435 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	PDCL2	Q8N4E4	241 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	TTC39C	Q8N584	583 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	AOPEP	Q8N6M6	819 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ARL10	Q8N8L6	244 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	OR6B3	Q8NGW1	331 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	OR10T2	Q8NGX3	314 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	LNX1	Q8TBB1	728 aa	Predicted RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	TAS1R2	Q8TE23	839 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	C2orf15	Q8WU43	125 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ST8SIA4	Q92187	359 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	BORCS6	Q96GS4	357 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	BPIFA3	Q9BQP9	254 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	SYT15	Q9BQS2	421 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	DESI2	Q9BSY9	194 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	XYLT2	Q9H1B5	865 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	SNX25	Q9H3E2	840 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	PLEKHA4	Q9H4M7	779 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	PRDM13	Q9H4Q3	707 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	SMYD3	Q9H7B4	428 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	TM7SF3	Q9NS93	570 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	RAB20	Q9NX57	234 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ZDHHC7	Q9NXF8	308 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	DDX43	Q9NXZ2	648 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	GCNT4	Q9P109	453 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	NXF1	Q9UBU9	619 aa	Known RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ADGRE2	Q9UHX3	823 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	VPS28	Q9UK41	221 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	FBXW11	Q9UKB1	542 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ATG2A	Q2TAZ0	1938 aa		4.56	□□□□□ -1.68
SFPQ-210	ENST00000490668	ATP8B3	O60423	1300 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	TRBV23OR9-2	A0A075B6M9	112 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	WDR27	A2RRH5	827 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	MTMR11	A4FU01	709 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	FAM90A27P	A6NNH2	459 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668		A8MXQ7	604 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668		H3BQ06	376 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668		H3BUI4	141 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	LINC01565	O15544	149 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	TACC1	O75410	805 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	HSPA4L	O95757	839 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	MLYCD	O95822	493 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	GLP2R	O95838	553 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	GSTM1	P09488	218 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.55	□□□□□ -1.68	7e-10	■■□□□ 13.3
SFPQ-210	ENST00000490668	OR4Q2	P0C623	313 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	TYR	P14679	529 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	ATF2	P15336	505 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	ALOX15	P16050	662 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	EPCAM	P16422	314 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	HOXB8	P17481	243 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	CD58	P19256	250 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	IL11	P20809	199 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	WARS	P23381	471 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	IGFBP6	P24592	240 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	HOXA9	P31269	272 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	OR1D2	P34982	312 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	RAP1GAP	P47736	663 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	PSMC1	P62191	440 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	ITIH3	Q06033	890 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	SMAD4	Q13485	552 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	CUL2	Q13617	745 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	SCARB2	Q14108	478 aa		4.55	□□□□□ -1.68
SFPQ-210	ENST00000490668	VEPH1	Q14D04	833 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms