RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 FAM72CH0Y354 149 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TLR4O00206 839 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 PLK4O00444 970 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TPM2P07951 284 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TBC1D3HP0C7X1 549 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 FTH1P19P0C7X4 201 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 KRT3P12035 628 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 ATP1A3P13637 1013 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 RHOQP17081 205 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 GLDCP23378 1020 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 SDC4P31431 198 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 GRK6P43250 576 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 NUMBP49757 651 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 NXPH1P58417 271 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 PPP2CBP62714 309 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 PPP2CAP67775 309 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 ARF5P84085 180 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 ATP11AP98196 1134 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 GNA12Q03113 381 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 UBXN1Q04323 297 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TYRO3Q06418 890 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 C15orf59Q2T9L4 293 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 ACCSLQ4AC99 568 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 FAM72AQ5TYM5 149 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TBC1D3GQ6DHY5 549 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TBC1D3CQ6IPX1 549 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 NAPEPLDQ6IQ20 393 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 FAM72DQ6L9T8 149 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 WDR59Q6PJI9 974 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 LRSAM1Q6UWE0 723 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 DPY19L3Q6ZPD9 716 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TFAP2DQ7Z6R9 452 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 FAM72BQ86X60 149 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 SPATS2Q86XZ4 545 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TBC1D3Q8IZP1 549 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 ATP11CQ8NB49 1132 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TMEM145Q8NBT3 493 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 NEK11Q8NG66 645 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 SAP25Q8TEE9 199 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 BAP1Q92560 729 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 SKA1Q96BD8 255 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 VCPIP1Q96JH7 1222 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 ELF4Q99607 663 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 C11orf70Q9BRQ4 267 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 MAGEB5Q9BZ81 275 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 PREBQ9HCU5 417 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 METTL5Q9NRN9 209 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 ADAM22Q9P0K1 906 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 TMEM63CQ9P1W3 806 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 APOBEC2Q9Y235 224 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 DOCK9Q9BZ29 2069 aa9.94□□□□□ -0.82
TMEM39A-210ENST00000490099 GOLGA4Q13439 2230 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 C1QTNF3-AMACRE9PGA6 284 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 TNFSF14O43557 240 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 RNGTTO60942 597 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 SRGAP2O75044 1071 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 LRIG2O94898 1065 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 GJB6O95452 261 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 PRNPP04156 253 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 PLEKP08567 350 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 ATXN1LP0C7T5 689 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 RRM1P23921 792 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 L1CAMP32004 1257 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 MLLT3P42568 568 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 NSFP46459 744 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 MAPKAPK2P49137 400 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 CCT8P50990 548 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 ZNF284Q2VY69 593 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 SFMBT2Q5VUG0 894 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 RETSATQ6NUM9 610 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 C22orf39Q6P5X5 142 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 LINGO4Q6UY18 593 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 TMPRSS7Q7RTY8 843 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 PRPF39Q86UA1 669 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 PCDH20Q8N6Y1 951 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 CHST14Q8NCH0 376 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 ANKRD20A12PQ8NF67 263 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 RHBDD1Q8TEB9 315 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 SETD7Q8WTS6 366 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 TSC1Q92574 1164 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 ARRDC3Q96B67 414 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 SERAC1Q96JX3 654 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 AGPAT1Q99943 283 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 MAGEH1Q9H213 219 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 NOL6Q9H6R4 1146 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 NDFIP2Q9NV92 336 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 TMEM248Q9NWD8 314 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 WASF2Q9Y6W5 498 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 PLXNB3Q9ULL4 1909 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 PLXNA2O75051 1894 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 PKD1L2Q7Z442 2459 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 APC2O95996 2303 aa9.93□□□□□ -0.82
TMEM39A-210ENST00000490099 ZZEF1O43149 2961 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 TMEM131Q92545 1883 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 NYNRINQ9P2P1 1898 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ACACAQ13085 2346 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms