RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SRGAP2BP0DMP2 458 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 COMTP21964 271 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 FGFR3P22607 806 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 CYP2C18P33260 490 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 RPA3P35244 121 aaPredicted RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 ARSEP51690 589 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ACTR3P61158 418 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 EIF4EBP2Q13542 120 aaPredicted RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 RASA2Q15283 850 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ARTNQ5T4W7 220 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ZDHHC14Q8IZN3 488 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 DEPDC4Q8N2C3 294 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 CENPIQ92674 756 aaPredicted RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 RUNDC3BQ96NL0 473 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 C11orf70Q9BRQ4 267 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 DNAJB4Q9UDY4 337 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 AMFRQ9UKV5 643 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 STRIP2Q9ULQ0 834 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 CASTOR2A6NHX0 329 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 AP3B1O00203 1094 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CDK2AP1O14519 115 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 SORBS2O94875 1100 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 VNN2O95498 520 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 PTPN1P18031 435 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 ADSLP30566 484 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 CHKAP35790 457 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 MARCKSL1P49006 195 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 EPHB1P54762 984 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 RPL7AP62424 266 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 SLC25A11Q02978 314 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 BST2Q10589 180 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 TRIP13Q15645 432 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 CARTPTQ16568 116 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CCDC142Q17RM4 750 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 LRRC38Q5VT99 294 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 OTUD1Q5VV17 481 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 ZDHHC17Q8IUH5 632 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CLVS1Q8IUQ0 354 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 MYO1HQ8N1T3 1032 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 OR10T2Q8NGX3 314 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 BCL7CQ8WUZ0 217 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 KRT35Q92764 455 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 NT5C3BQ969T7 300 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 FAR2Q96K12 515 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 VN1R3Q9BXE9 311 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 DUSP16Q9BY84 665 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 MARCH7Q9H992 704 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CHORDC1Q9UHD1 332 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 ZNHIT2Q9UHR6 403 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 KIF26AQ9ULI4 1882 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 TBKBP1A7MCY6 615 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 KRT15P19012 456 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 RFC1P35251 1148 aaPredicted RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 CALCOCO2Q13137 446 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 SLC1A5Q15758 541 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CLUL1Q15846 466 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CYP1B1Q16678 543 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CCDC58Q4VC31 144 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 NIPAL1Q6NVV3 410 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.98□□□□□ -0.81
NOD1-208ENST00000489614 FAM183BPQ6ZVS7 135 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 EME1Q96AY2 570 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 PAWRQ96IZ0 340 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 PIWIL1Q96J94 861 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 HEXIM2Q96MH2 286 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 HERC2P3Q9BVR0 1158 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 MRPS26Q9BYN8 205 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 IRF2BPLQ9H1B7 796 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 MRPL47Q9HD33 250 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 ASNSD1Q9NWL6 643 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 C2CD4BA6NLJ0 364 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 F8W8V4 182 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 M0QYV0 167 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 PSTPIP1O43586 416 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 UGT1A9O60656 530 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 HUS1O60921 280 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 BEST1O76090 585 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 ENDOD1O94919 500 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 ODC1P11926 461 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CCDC130P13994 396 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CPA3P15088 417 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 UGT1A6P19224 532 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 UGT1A1P22309 533 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 UGT1A4P22310 534 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 IFNA8P32881 189 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 UGT1A3P35503 534 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 UGT1A5P35504 534 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 GATMP50440 423 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 BCAT1P54687 386 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 MYBPC1Q00872 1141 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 OASLQ15646 514 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 TRMT5Q32P41 509 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 C2CD6Q53TS8 623 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
NOD1-208ENST00000489614 GLB1LQ6UWU2 654 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 C4orf22Q6V702 233 aa9.98□□□□□ -0.81
NOD1-208ENST00000489614 CLEC20AQ6ZU45 233 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms