RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 EIF4E1BA6NMX2 242 aaKnown RBP12.67□□□□□ -0.38
CPSF3-204ENST00000489403 FFAR2O15552 330 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 BRINP1O60477 761 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 ZNF821O75541 412 aaPredicted RBP12.67□□□□□ -0.38
CPSF3-204ENST00000489403 LEFTY1O75610 366 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 PIAS2O75928 621 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 F9P00740 461 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 OR1E1P30953 314 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 AKT2P31751 481 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 SCNN1AP37088 669 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 GABRB2P47870 512 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 CLDN2P57739 230 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 DAB2P98082 770 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 CCDC15Q0P6D6 951 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 MAN2A1Q16706 1144 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 SLC25A52Q3SY17 297 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 FAM102AQ5T9C2 384 aaPredicted RBP12.67□□□□□ -0.38
CPSF3-204ENST00000489403 SEL1L3Q68CR1 1132 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 TRNP1Q6NT89 227 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 LRRC31Q6UY01 552 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 KDM7AQ6ZMT4 941 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 LRRC69Q6ZNQ3 347 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 DPY19L3Q6ZPD9 716 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 ERN2Q76MJ5 926 aaKnown RBP12.67□□□□□ -0.38
CPSF3-204ENST00000489403 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 SLC22A18ASQ8N1D0 253 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 C1orf74Q96LT6 269 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 UBL7Q96S82 380 aaPredicted RBP12.67□□□□□ -0.38
CPSF3-204ENST00000489403 HDAC8Q9BY41 377 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 PRORYQ9H606 182 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 ZNF212Q9UDV6 495 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 WASF2Q9Y6W5 498 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 IGSF10Q6WRI0 2623 aa12.67□□□□□ -0.38
CPSF3-204ENST00000489403 RRP8O43159 456 aaKnown RBP12.66□□□□□ -0.38
CPSF3-204ENST00000489403 ZMPSTE24O75844 475 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 ENDOD1O94919 500 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 PCDH8O95206 1070 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 MT-CO3P00414 261 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 CYP11B1P15538 503 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 FLT3P36888 993 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 SERPINH1P50454 418 aaKnown RBP12.66□□□□□ -0.38
CPSF3-204ENST00000489403 NEK3P51956 506 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 BPIFB4P59827 614 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 RAPGEF1Q13905 1077 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 FGL2Q14314 439 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 DRAP1Q14919 205 aaPredicted RBP12.66□□□□□ -0.38
CPSF3-204ENST00000489403 TPD52L1Q16890 204 aaPredicted RBP12.66□□□□□ -0.38
CPSF3-204ENST00000489403 TMEM259Q4ZIN3 620 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 C2CD6Q53TS8 623 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 ACBD5Q5T8D3 534 aaPredicted RBP12.66□□□□□ -0.38
CPSF3-204ENST00000489403 TMC6Q7Z403 805 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 BNIPLQ7Z465 357 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 ABI3BPQ7Z7G0 1075 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 BAP1Q92560 729 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 C18orf8Q96DM3 657 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 PPP1R16AQ96I34 528 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 CFAP57Q96MR6 1250 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 PDCL3Q9H2J4 239 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 GPR27Q9NS67 375 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 PAXBP1Q9Y5B6 917 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 PCDHB1Q9Y5F3 818 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 RAI2Q9Y5P3 530 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 FHOD1Q9Y613 1164 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 FASNP49327 2511 aaKnown RBP12.66□□□□□ -0.38
CPSF3-204ENST00000489403 TRPM6Q9BX84 2022 aa12.66□□□□□ -0.38
CPSF3-204ENST00000489403 ILVBLA1L0T0 632 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 A6NNZ2 444 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 SRGAP2O75044 1071 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 PRB1P04280 392 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 CKMT1AP12532 417 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 ADRB3P13945 408 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 RECQLP46063 649 aaPredicted RBP12.65□□□□□ -0.38
CPSF3-204ENST00000489403 UBE2HP62256 183 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 ARF5P84085 180 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 E2F1Q01094 437 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 TBC1D25Q3MII6 688 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 VWA3BQ502W6 1294 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 Q6ZSR6 202 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
CPSF3-204ENST00000489403 ERICH1Q86X53 443 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 FAM131BQ86XD5 332 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 MLKLQ8NB16 471 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 FGF11Q92914 225 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 IFT43Q96FT9 208 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 BMFQ96LC9 184 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 HAPLN3Q96S86 360 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 SPON2Q9BUD6 331 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 CEP44Q9C0F1 390 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 ATP13A1Q9HD20 1204 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 NLGN3Q9NZ94 848 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 TMEM59LQ9UK28 342 aa12.65□□□□□ -0.38
CPSF3-204ENST00000489403 FCF1Q9Y324 198 aaKnown RBP12.65□□□□□ -0.38
CPSF3-204ENST00000489403 FADS3Q9Y5Q0 445 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms