RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 OSBPL2Q9H1P3 480 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 TMEM51Q9NW97 253 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 GPATCH2LQ9NWQ4 482 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 WASF3Q9UPY6 502 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 CA5BQ9Y2D0 317 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 CABIN1Q9Y6J0 2220 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 C10orf142B7Z368 130 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 CREB3O43889 395 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 CD160O95971 181 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 CCDC172P0C7W6 258 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 RHOQP17081 205 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 GKP32189 559 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 CTSKP43235 329 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 CCR5P51681 352 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 TAS2R38P59533 333 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 NRG1Q02297 640 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-206ENST00000489142 KLHL40Q2TBA0 621 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 PIP5KL1Q5T9C9 394 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 SFMBT2Q5VUG0 894 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 RETSATQ6NUM9 610 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF783Q6ZMS7 281 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 SLFN11Q7Z7L1 901 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 OR6K2Q8NGY2 324 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 ARHGEF2Q92974 986 aaKnown RBP14.31□□□□□ -0.12
VTI1A-206ENST00000489142 FAM131CQ96AQ9 280 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 CCDC114Q96M63 670 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 SCNM1Q9BWG6 230 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 TMEM248Q9NWD8 314 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 ARHGAP20Q9P2F6 1191 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 IL36AQ9UHA7 158 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 KLK13Q9UKR3 277 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 PCOLCE2Q9UKZ9 415 aa14.31□□□□□ -0.12
VTI1A-206ENST00000489142 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-206ENST00000489142 ANKRD62A6NC57 917 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 GOLGA8CPA6NN73 597 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 C1QTNF9BB2RNN3 333 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 VILLO15195 856 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 CBFA2T3O75081 653 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 LEFTY1O75610 366 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 FTH1P19P0C7X4 201 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 C1QTNF9P0C862 333 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 PRLRP16471 622 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 CD38P28907 300 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 RECQLP46063 649 aaPredicted RBP14.3□□□□□ -0.12
VTI1A-206ENST00000489142 MAPKAPK2P49137 400 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 CLCN6P51797 869 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 SCAPQ12770 1279 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 MAMLD1Q13495 774 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 NR1I3Q14994 352 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 EFHC2Q5JST6 749 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 TMC6Q7Z403 805 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF354CQ86Y25 554 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 GATAD2AQ86YP4 633 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 RYBPQ8N488 228 aaPredicted RBP14.3□□□□□ -0.12
VTI1A-206ENST00000489142 CHCHD4Q8N4Q1 142 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 RHBDD1Q8TEB9 315 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 NTAN1Q96AB6 310 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 TRIM7Q9C029 511 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 TTYH3Q9C0H2 523 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 ZDHHC6Q9H6R6 413 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 FZD10Q9ULW2 581 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 MYO6Q9UM54 1294 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 WASF2Q9Y6W5 498 aa14.3□□□□□ -0.12
VTI1A-206ENST00000489142 EPG5Q9HCE0 2579 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 A0A1W2PQC6 194 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 A0A1W2PR77 199 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 DDX3XO00571 662 aaKnown RBP eCLIP14.29□□□□□ -0.122e-9■■□□□ 14.2
VTI1A-206ENST00000489142 SLC7A4O43246 635 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 LATO43561 262 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 RAMP2O60895 175 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 RNGTTO60942 597 aaKnown RBP14.29□□□□□ -0.12
VTI1A-206ENST00000489142 PRNPP04156 253 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF883P0CG24 379 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 PSMA2P25787 234 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 EPHB2P29323 1055 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 CCT8P50990 548 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 CCNHP51946 323 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-206ENST00000489142 FANCCQ00597 558 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 KLHL30Q0D2K2 578 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-206ENST00000489142 ST3GAL2Q16842 350 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 ATXN7L2Q5T6C5 722 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-206ENST00000489142 NAPEPLDQ6IQ20 393 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 PRPF39Q86UA1 669 aaKnown RBP14.29□□□□□ -0.12
VTI1A-206ENST00000489142 PCDH20Q8N6Y1 951 aaKnown RBP14.29□□□□□ -0.12
VTI1A-206ENST00000489142 TMIEQ8NEW7 156 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 CNPY3Q9BT09 278 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 KLC2Q9H0B6 622 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 NOL6Q9H6R4 1146 aaKnown RBP14.29□□□□□ -0.12
VTI1A-206ENST00000489142 FZD3Q9NPG1 666 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 DYRK4Q9NR20 520 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 PTPRBP23467 1997 aa14.29□□□□□ -0.12
VTI1A-206ENST00000489142 A0A1W2PQU0 124 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 SLC31A1O15431 190 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 FLRT2O43155 660 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 FTLP02792 175 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-206ENST00000489142 L1CAMP32004 1257 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 CA9Q16790 459 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms