RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 NUSAP1Q9BXS6 441 aaKnown RBP13.15□□□□□ -0.3
PHF1-210ENST00000488767 RCOR3Q9P2K3 495 aaPredicted RBP13.15□□□□□ -0.3
PHF1-210ENST00000488767 IL36AQ9UHA7 158 aa13.15□□□□□ -0.3
PHF1-210ENST00000488767 DOCK4Q8N1I0 1966 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 K7ERQ8 282 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 DFFAO00273 331 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 KPNA3O00505 521 aaPredicted RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 SLC7A4O43246 635 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 ZMPSTE24O75844 475 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 MTA2O94776 668 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 CFIP05156 583 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 RARAP10276 462 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 ERCC2P18074 760 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 ITPKAP23677 461 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 IL1R2P27930 398 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 CHRNA3P32297 505 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 SLC1A1P43005 524 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 CDH6P55285 790 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 RHOAP61586 193 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 SNRPD1P62314 119 aaKnown RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 ARF5P84085 180 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 SLC25A11Q02978 314 aaKnown RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 SERINC3Q13530 473 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 INO80DQ53TQ3 878 aaPredicted RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 CARD16Q5EG05 197 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 PLA2G2CQ5R387 149 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 TMIEQ8NEW7 156 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 OR2A12Q8NGT7 310 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 PIP4K2CQ8TBX8 421 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 HMCESQ96FZ2 354 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 CALR3Q96L12 384 aaKnown RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 GDAP1L1Q96MZ0 367 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 MIR1-1HGQ9H1L0 117 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 TNKS2Q9H2K2 1166 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 SP110Q9HB58 689 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 OSGEPQ9NPF4 335 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 CD93Q9NPY3 652 aa13.14□□□□□ -0.31
PHF1-210ENST00000488767 CWC15Q9P013 229 aaKnown RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 UBA2Q9UBT2 640 aaPredicted RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 CDV3Q9UKY7 258 aaKnown RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
PHF1-210ENST00000488767 EML5Q05BV3 1969 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 METTL12A8MUP2 240 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 SMAD6O43541 496 aaKnown RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 IGSF6O95976 241 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 GSRP00390 522 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 ACSL1P33121 698 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 ATXN3P54252 364 aaPredicted RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 HADHBP55084 474 aaKnown RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 DPYSQ14117 519 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 PDK2Q15119 407 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 CCDC6Q16204 474 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 DUOXA1Q1HG43 343 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 CYP4V2Q6ZWL3 525 aaPredicted RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 POLNQ7Z5Q5 900 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 OR2AP1Q8NGE2 309 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 OR2T34Q8NGX1 318 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 OR14C36Q8NHC7 312 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 GRIN3AQ8TCU5 1115 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 NSMCE1Q8WV22 266 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 CELF6Q96J87 481 aaKnown RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 LRIG1Q96JA1 1093 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 CSPG4P5Q96PW8 444 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 BAG1Q99933 345 aaPredicted RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 HEPHQ9BQS7 1158 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 CALN1Q9BXU9 219 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 TM6SF2Q9BZW4 377 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 KDM4CQ9H3R0 1056 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 PARD6AQ9NPB6 346 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 HAUS2Q9NVX0 235 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 HECAQ9UBI9 543 aaPredicted RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 PILRBQ9UKJ0 227 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 PPM1HQ9ULR3 514 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 SPAG17Q6Q759 2223 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 PLXND1Q9Y4D7 1925 aa13.13□□□□□ -0.31
PHF1-210ENST00000488767 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
PHF1-210ENST00000488767 SPOPO43791 374 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 TMCC1O94876 653 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 FSBPO95073 299 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 NDUFA10O95299 355 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 PAPOLAP51003 745 aaKnown RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 CCNHP51946 323 aaPredicted RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 GSDMDP57764 484 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 RFTN1Q14699 578 aaPredicted RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 SF3A2Q15428 464 aaKnown RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.12□□□□□ -0.31
PHF1-210ENST00000488767 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 DPY19L3Q6ZPD9 716 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 AADATQ8N5Z0 425 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 NETO1Q8TDF5 533 aa13.12□□□□□ -0.31
PHF1-210ENST00000488767 SKA1Q96BD8 255 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms