RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SGF29Q96ES7 293 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 ZNF341Q9BYN7 854 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 CCDC90BQ9GZT6 254 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 LHPPQ9H008 270 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 RAD21L1Q9H4I0 556 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 ZNF70Q9UC06 446 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-229ENST00000488765 IGLV3-22A0A075B6J6 115 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 PSMD10O75832 226 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 DLGAP3O95886 979 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 PRKCGP05129 697 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 MYCLP12524 364 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-229ENST00000488765 DCKP27707 260 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 KCNJ11Q14654 390 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 IMPG1Q17R60 797 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.42■□□□□ 0.22
MCF2L-229ENST00000488765 VTI1AQ96AJ9 217 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 SLC45A3Q96JT2 553 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 DMRTB1Q96MA1 342 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 DDX28Q9NUL7 540 aaKnown RBP16.42■□□□□ 0.22
MCF2L-229ENST00000488765 GDAP2Q9NXN4 497 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 DSEQ9UL01 958 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 PNMA8BQ9ULN7 279 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-229ENST00000488765 CLDN25C9JDP6 229 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 MSI1O43347 362 aaKnown RBP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 FAM189A1O60320 539 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 USP12O75317 370 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 STAM2O75886 525 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 METTL18O95568 372 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 SNAP29O95721 258 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 FYNP06241 537 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 KCNC4Q03721 635 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 TRIM25Q14258 630 aaKnown RBP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 GPAT2Q6NUI2 795 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 PGAM4Q8N0Y7 254 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 ZCCHC7Q8N3Z6 543 aaKnown RBP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 OR7G1Q8NGA0 311 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 OR9I1Q8NGQ6 314 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 CRYGNQ8WXF5 182 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 C17orf80Q9BSJ5 609 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 MAGEB5Q9BZ81 275 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 NYAP2Q9P242 653 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 IFT52Q9Y366 437 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 MEN1O00255 615 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 EI24O14681 340 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 PHGDHO43175 533 aaKnown RBP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 MGEA5O60502 916 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 SNAP91O60641 907 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 CD19P15391 556 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 NAGLUP54802 743 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 GALNT2Q10471 571 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 FAM117BQ6P1L5 589 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 MROQ9BYG7 248 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 PRDM8Q9NQV8 689 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 CTDP1Q9Y5B0 961 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 SNX9Q9Y5X1 595 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 RREB1Q92766 1687 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 PTGES3LE9PB15 166 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 DLGAP1O14490 977 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 AQP6Q13520 282 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 SMU1Q2TAY7 513 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 TBCELQ5QJ74 424 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 ZBTB41Q5SVQ8 909 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 GET4Q7L5D6 327 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-229ENST00000488765 ITIH5Q86UX2 942 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 LRCH3Q96II8 777 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 ZDHHC2Q9UIJ5 367 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
MCF2L-229ENST00000488765 PIGNO95427 931 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 MMP8P22894 467 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 CEP78Q5JTW2 689 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 TDRD10Q5VZ19 366 aaKnown RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 DLK2Q6UY11 383 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SLCO6A1Q86UG4 719 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 FAM35AQ86V20 835 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 PQLC3Q8N755 202 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ZNF486Q96H40 463 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ZFYVE19Q96K21 471 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 OMDQ99983 421 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 EXD2Q9NVH0 621 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ZHX2Q9Y6X8 837 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ZNFX1Q9P2E3 1918 aaKnown RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 TBX3O15119 743 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 KRT3P12035 628 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 PRKACBP22694 351 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 YBX1P67809 324 aaKnown RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 KRT76Q01546 638 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 TRPC3Q13507 836 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 DGKDQ16760 1214 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 DDX60LQ5H9U9 1706 aaKnown RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SNAP47Q5SQN1 464 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SPATC1Q76KD6 591 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 AKAP14Q86UN6 197 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms