RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 A0A1W2PPC1 479 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 DPPA5A6NC42 116 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 GTPBP1O00178 669 aaKnown RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 EPB41L2O43491 1005 aaKnown RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 USP12O75317 370 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 NEURL1O76050 574 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 TOMM40O96008 361 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 HLA-DQA2P01906 255 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 CRYABP02511 175 aaKnown RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 CTSAP10619 480 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 CHRNA5P30532 468 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 PSMC2P35998 433 aaKnown RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 CYP2J2P51589 502 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 CDH15P55291 814 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 VAMP2P63027 116 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 RPP30P78346 268 aaKnown RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 TBL3Q12788 808 aaKnown RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 PLK5Q496M5 336 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 FAM171A1Q5VUB5 890 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 HMBOX1Q6NT76 420 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 CYB5R4Q7L1T6 521 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 CCDC25Q86WR0 208 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 BCAS4Q8TDM0 211 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 ZUFSPQ96AP4 578 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 EME1Q96AY2 570 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 ELP4Q96EB1 424 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 CD180Q99467 661 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 MPHOSPH8Q99549 860 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 NPLQ9BXD5 320 aaPredicted RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 LMAN2LQ9H0V9 348 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 TTC12Q9H892 705 aaPredicted RBP3.51□□□□□ -1.85
CD46-215ENST00000488596 PREBQ9HCU5 417 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 ANAPC4Q9UJX5 808 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 PNMA2Q9UL42 364 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 TBX20Q9UMR3 447 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 ICKQ9UPZ9 632 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 CYP46A1Q9Y6A2 500 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 TTC3P53804 2025 aa3.51□□□□□ -1.85
CD46-215ENST00000488596 FAM90A8PA6NJQ4 464 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 RHODO00212 210 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 TNPO2O14787 897 aaKnown RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 PER2O15055 1255 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 SMAD6O43541 496 aaKnown RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 STRNO43815 780 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 TULP3O75386 442 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 CD4P01730 458 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 URODP06132 367 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 FAM90A13PP0C7W8 464 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 FAM90A24PP0C7X0 464 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 ABCD3P28288 659 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 ELF1P32519 619 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 GJC1P36383 396 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 STAT1P42224 750 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 CASP6P55212 293 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 RPS13P62277 151 aaKnown RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 MPP1Q00013 466 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 PMPCAQ10713 525 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 GPR68Q15743 365 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 SLC18A3Q16572 532 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 C5orf22Q49AR2 442 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 FAM69AQ5T7M9 428 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 TTLL5Q6EMB2 1281 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 AADACL2Q6P093 401 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 GJB7Q6PEY0 223 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 DEF8Q6ZN54 512 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 UBE2Q1Q7Z7E8 422 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.5□□□□□ -1.851e-6■■■□□ 18.3
CD46-215ENST00000488596 TEX19Q8NA77 164 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 CMASQ8NFW8 434 aaPredicted RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 CNOT9Q92600 299 aaKnown RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 ZNF419Q96HQ0 510 aaPredicted RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 EYA3Q99504 573 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 LBHD1Q9BQE6 289 aaPredicted RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 FUZQ9BT04 418 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 AGXT2Q9BYV1 514 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 HIPK2Q9H2X6 1198 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 HIPK3Q9H422 1215 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 CXorf56Q9H5V9 222 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 PLEKHB1Q9UF11 243 aaPredicted RBP3.5□□□□□ -1.85
CD46-215ENST00000488596 DHDHQ9UQ10 334 aa3.5□□□□□ -1.85
CD46-215ENST00000488596 TRBV5-3A0A0A0MS03 114 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 OR6C68A6NDL8 312 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 CYSRT1A8MQ03 144 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 FOXO6A8MYZ6 492 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 SPTLC2O15270 562 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 MBD4O95243 580 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 KRT9P35527 623 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 SKIV2L2P42285 1042 aaKnown RBP3.49□□□□□ -1.85
CD46-215ENST00000488596 PAFAH1B1P43034 410 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 ME1P48163 572 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 ID2Q02363 134 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 DDX10Q13206 875 aaKnown RBP3.49□□□□□ -1.85
CD46-215ENST00000488596 BAK1Q16611 211 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 SMTNL2Q2TAL5 461 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 ENTPD8Q5MY95 495 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 VWA5B1Q5TIE3 1220 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 TMEM268Q5VZI3 342 aa3.49□□□□□ -1.85
CD46-215ENST00000488596 ACAD10Q6JQN1 1059 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms