RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FAM171A1Q5VUB5 890 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 NCAPH2Q6IBW4 605 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 COLCA1Q6ZS62 124 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 B4GALNT4Q76KP1 1039 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 MDGA2Q7Z553 956 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 GALNT7Q86SF2 657 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 MORC4Q8TE76 937 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 CLEC4CQ8WTT0 213 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 NSMCE1Q8WV22 266 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 KCNJ9Q92806 393 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 ZNF333Q96JL9 665 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 CADM1Q9BY67 442 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 ACTR5Q9H9F9 607 aaPredicted RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 MSRB1Q9NZV6 116 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 SRP68Q9UHB9 627 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 KCND3Q9UK17 655 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 DHDHQ9UQ10 334 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 DERAQ9Y315 318 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 RRP7AQ9Y3A4 280 aaKnown RBP4.74□□□□□ -1.65
ITGB1-214ENST00000488427 SQORQ9Y6N5 450 aa4.74□□□□□ -1.65
ITGB1-214ENST00000488427 CASZ1Q86V15 1759 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 PREX2Q70Z35 1606 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 SYN3O14994 580 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 TSPAN3O60637 253 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 METTL18O95568 372 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 CHN1P15882 459 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 PRPH2P23942 346 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 SLC16A2P36021 539 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 POSTNQ15063 836 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 SMTNL2Q2TAL5 461 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 PLK5Q496M5 336 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 PIK3CD-AS1Q5SR53 167 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 DAB2IPQ5VWQ8 1189 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 TMEM268Q5VZI3 342 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 SLC30A9Q6PML9 568 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 SYNE3Q6ZMZ3 975 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 SYT13Q7L8C5 426 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 KDELC2Q7Z4H8 507 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 NKAPQ8N5F7 415 aaKnown RBP4.73□□□□□ -1.65
ITGB1-214ENST00000488427 ANKRD42Q8N9B4 389 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 AFG1LQ8WV93 481 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 NCSTNQ92542 709 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 KTI12Q96EK9 354 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-214ENST00000488427 FRG2BQ96QU4 278 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 TWSG1Q9GZX9 223 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 MLXIPLQ9NP71 852 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 RIPOR2Q9Y4F9 1068 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 MORC2Q9Y6X9 1032 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-214ENST00000488427 INO80Q9ULG1 1556 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-214ENST00000488427 CUL9Q8IWT3 2517 aa4.73□□□□□ -1.65
ITGB1-214ENST00000488427 CXorf65A6NEN9 183 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 HBP1O60381 514 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 NBNO60934 754 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 HSD3B1P14060 373 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 PDCLQ13371 301 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 PRTGQ2VWP7 1150 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 ARL13AQ5H913 290 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 JMJD6Q6NYC1 403 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 AAGABQ6PD74 315 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 BRINP3Q76B58 766 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 BHLHA9Q7RTU4 235 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 CCDC25Q86WR0 208 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 C2CD5Q86YS7 1000 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 FTSJ3Q8IY81 847 aaKnown RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 SLC25A41Q8N5S1 370 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 NRACQ8N912 160 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 ZNF419Q96HQ0 510 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 ZSCAN31Q96LW9 406 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 ZNF48Q96MX3 618 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 PPP1R10Q96QC0 940 aaKnown RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 TEFMQ96QE5 360 aaKnown RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 CLPBQ9H078 707 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 ABHD16BQ9H3Z7 469 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 PTPRHQ9HD43 1115 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 FBXO40Q9UH90 709 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 PCDHA12Q9UN75 941 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 COL22A1Q8NFW1 1626 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-214ENST00000488427 ATP10DQ9P241 1426 aa4.72□□□□□ -1.65
ITGB1-214ENST00000488427 PARD3Q8TEW0 1356 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 C17orf102A2RUQ5 167 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 B4DGG1 531 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 MDM4O15151 490 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 ANP32CO43423 234 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 NDUFB8O95169 186 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 IFNA2P01563 188 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 WNT1P04628 370 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 MYZAPP0CAP1 466 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 PSG1P11464 419 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 VEGFAP15692 232 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-214ENST00000488427 ENTPD1P49961 510 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 RHAGQ02094 409 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 PPFIA1Q13136 1202 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 FBXO47Q5MNV8 452 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 TTLL5Q6EMB2 1281 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 DENND1BQ6P3S1 775 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 PDXDC1Q6P996 788 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 RTL10Q7L3V2 364 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 PIP4P1Q86T03 277 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms