RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 CD27P26842 260 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 MIPP30301 263 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 CHRNA3P32297 505 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 CSNK1EP49674 416 aaKnown RBP13.17□□□□□ -0.3
RPSA-208ENST00000487876 ATXN3P54252 364 aaPredicted RBP13.17□□□□□ -0.3
RPSA-208ENST00000487876 AIF1P55008 147 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 POLD3Q15054 466 aaPredicted RBP13.17□□□□□ -0.3
RPSA-208ENST00000487876 PSAPL1Q6NUJ1 521 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 RETSATQ6NUM9 610 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 DPY19L3Q6ZPD9 716 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 DSG4Q86SJ6 1040 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 RTL3Q8N8U3 475 aaKnown RBP13.17□□□□□ -0.3
RPSA-208ENST00000487876 NETO2Q8NC67 525 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 FAM131CQ96AQ9 280 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 ARRDC3Q96B67 414 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 ARHGEF26Q96DR7 871 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 IQCDQ96DY2 449 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 BTBD6Q96KE9 485 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
RPSA-208ENST00000487876 EPAS1Q99814 870 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 MAGEH1Q9H213 219 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 DHX35Q9H5Z1 703 aaKnown RBP13.17□□□□□ -0.3
RPSA-208ENST00000487876 IL21RQ9HBE5 538 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
RPSA-208ENST00000487876 SCINQ9Y6U3 715 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 ANKRD36A6QL64 1941 aa13.17□□□□□ -0.3
RPSA-208ENST00000487876 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 CABIN1Q9Y6J0 2220 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 C1QTNF3-AMACRE9PGA6 284 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 KPNA3O00505 521 aaPredicted RBP13.16□□□□□ -0.3
RPSA-208ENST00000487876 WNT9AO14904 365 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 LRCH4O75427 683 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 TPM3P06753 285 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 SYPP08247 313 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 DESP17661 470 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 GKP32189 559 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 AFF3P51826 1226 aaKnown RBP13.16□□□□□ -0.3
RPSA-208ENST00000487876 TAS2R38P59533 333 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 TPI1P60174 286 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 FOXK2Q01167 660 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
RPSA-208ENST00000487876 KCNT1Q5JUK3 1230 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 PIP5KL1Q5T9C9 394 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 FAM46CQ5VWP2 391 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 SPECC1LQ69YQ0 1117 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 VPS36Q86VN1 386 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 ZNF354CQ86Y25 554 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 DEFB124Q8NES8 71 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 OR6K2Q8NGY2 324 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 HMCESQ96FZ2 354 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 CCDC114Q96M63 670 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 SLC6A18Q96N87 628 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 TM6SF2Q9BZW4 377 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 IL36AQ9UHA7 158 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 NENFQ9UMX5 172 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.16□□□□□ -0.3
RPSA-208ENST00000487876 WASF2Q9Y6W5 498 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 AKAP13Q12802 2813 aa13.16□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3DA0A087WVF3 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3IA0A087WXS9 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3EA0A087X179 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3KA0A087X1G2 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 A0A1W2PPC4 97 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3FA6NER0 549 aaPredicted RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3LB9A6J9 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 RASA4BC9J798 803 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 RASA4O43374 803 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 PLRG1O43660 514 aaKnown RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 KDELR3O43731 214 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 OPHN1O60890 802 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 LEFTY1O75610 366 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 GJB3O75712 270 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 RNF8O76064 485 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3HP0C7X1 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 IL1R2P27930 398 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 MAT2AP31153 395 aaKnown RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 HNRNPH3P31942 346 aaKnown RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 ETFBP38117 255 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 NOVA1P51513 510 aaKnown RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 DNA2P51530 1060 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 CCNHP51946 323 aaPredicted RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 SLC20A2Q08357 652 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 KIF19Q2TAC6 998 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 CARD16Q5EG05 197 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 ERMARDQ5T6L9 678 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3GQ6DHY5 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3CQ6IPX1 549 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 TBC1D3Q8IZP1 549 aaPredicted RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 PCDH20Q8N6Y1 951 aaKnown RBP13.15□□□□□ -0.3
RPSA-208ENST00000487876 TMIEQ8NEW7 156 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 VOPP1Q96AW1 172 aa13.15□□□□□ -0.3
RPSA-208ENST00000487876 CELF6Q96J87 481 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms