RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ZBED4O75132 1171 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 SRGAP2BP0DMP2 458 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 HOXB8P17481 243 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-217ENST00000487825 CERS1P27544 350 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 EPHB1P54762 984 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 WNT3P56703 355 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 KRTAP10-11P60412 298 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 TFCP2Q12800 502 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 SLC13A2Q13183 592 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 PPP2R5BQ15173 497 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 PWP2Q15269 919 aaKnown RBP5.26□□□□□ -1.57
BRCA1-217ENST00000487825 TBC1D25Q3MII6 688 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 ANO6Q4KMQ2 910 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 NPNTQ6UXI9 565 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 TRIM72Q6ZMU5 477 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 OVCH2Q7RTZ1 564 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 NEK8Q86SG6 692 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 CAND1Q86VP6 1230 aaKnown RBP5.26□□□□□ -1.57
BRCA1-217ENST00000487825 IZUMO1Q8IYV9 350 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 TDRD5Q8NAT2 981 aaKnown RBP5.26□□□□□ -1.57
BRCA1-217ENST00000487825 ABHD11Q8NFV4 315 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 POF1BQ8WVV4 589 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 SEPT8Q92599 483 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 KAT2BQ92831 832 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 ZNF689Q96CS4 500 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-217ENST00000487825 NEUROD6Q96NK8 337 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 NECTIN4Q96NY8 510 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 LENG8Q96PV6 779 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-217ENST00000487825 B3GNT5Q9BYG0 378 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 SEMA4CQ9C0C4 833 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 TLE6Q9H808 572 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 DLGAP2Q9P1A6 1054 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 CDH22Q9UJ99 828 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 CELSR3Q9NYQ7 3312 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 MYH6P13533 1939 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 RSPH10B2B2RC85 870 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 AP4M1O00189 453 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 PHGDHO43175 533 aaKnown RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 MMP3P08254 477 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 RSPH10BP0C881 870 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 SLC7A1P30825 629 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 TECP42680 631 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 SSBP2P81877 361 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 BTG3Q14201 252 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 PTCHD3Q3KNS1 767 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 ZNF528Q3MIS6 628 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 SOWAHCQ53LP3 525 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 GORABQ5T7V8 394 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 N4BP2L1Q5TBK1 243 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 SLC9A4Q6AI14 798 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 FCRL6Q6DN72 434 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 SLC18B1Q6NT16 456 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 GAS2L3Q86XJ1 694 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 RAVER1Q8IY67 606 aaKnown RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 MAML2Q8IZL2 1156 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 APBB2Q92870 758 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 DAZAP1Q96EP5 407 aaKnown RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 NAF1Q96HR8 494 aaKnown RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 CCDC17Q96LX7 622 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 RIOK1Q9BRS2 568 aaKnown RBP5.25□□□□□ -1.57
BRCA1-217ENST00000487825 APOL5Q9BWW9 433 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 ATP6V0A4Q9HBG4 840 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 RNF146Q9NTX7 359 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 ZSCAN32Q9NX65 697 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 CYP39A1Q9NYL5 469 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 HDAC6Q9UBN7 1215 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 DOCK5Q9H7D0 1870 aa5.25□□□□□ -1.57
BRCA1-217ENST00000487825 SHROOM3Q8TF72 1996 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-217ENST00000487825 TP73O15350 636 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 RFPL1O75677 317 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 TUSC2O75896 110 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 NDUFB10O96000 172 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 TUBB4AP04350 444 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 DLDP09622 509 aaKnown RBP5.24□□□□□ -1.57
BRCA1-217ENST00000487825 FPR3P25089 353 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 THPOP40225 353 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 ALDH5A1P51649 535 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-217ENST00000487825 AGFG1P52594 562 aaKnown RBP5.24□□□□□ -1.57
BRCA1-217ENST00000487825 E2F1Q01094 437 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 UBE3AQ05086 875 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 TDGQ13569 410 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 RAB32Q13637 225 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 KLF9Q13886 244 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-217ENST00000487825 ETFDHQ16134 617 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 ODR4Q5SWX8 454 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 SLC2A7Q6PXP3 512 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 KIRREL2Q6UWL6 708 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 SERINC5Q86VE9 423 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 ZBTB44Q8NCP5 570 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 IL31RAQ8NI17 732 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 SCFD2Q8WU76 684 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 DYNLL2Q96FJ2 89 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 C5orf34Q96MH7 638 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 BHMT2Q9H2M3 363 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 SMURF2Q9HAU4 748 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 PIH1D3Q9NQM4 214 aaKnown RBP5.24□□□□□ -1.57
BRCA1-217ENST00000487825 MCM9Q9NXL9 1143 aa5.24□□□□□ -1.57
BRCA1-217ENST00000487825 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms