RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ANKRD36A6QL64 1941 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 MYOFQ9NZM1 2061 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.6□□□□□ -0.87
SF3B1-211ENST00000487698 FAM159BA6NKW6 160 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 FOXO6A8MYZ6 492 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 AP3B1O00203 1094 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 SCAMP3O14828 347 aaKnown RBP9.6□□□□□ -0.87
SF3B1-211ENST00000487698 TSPAN3O60637 253 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 PIAS1O75925 651 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 MMP2P08253 660 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 PTPN2P17706 415 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 DDX6P26196 483 aaKnown RBP eCLIP9.6□□□□□ -0.87
SF3B1-211ENST00000487698 NPY2RP49146 381 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 CDH17Q12864 832 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 NR1H3Q13133 447 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF177Q13360 481 aaPredicted RBP9.6□□□□□ -0.87
SF3B1-211ENST00000487698 MPP3Q13368 585 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 GPM6BQ13491 265 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
SF3B1-211ENST00000487698 CRYMQ14894 314 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 SLC5A9Q2M3M2 681 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 RNF43Q68DV7 783 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 ALG1LQ6GMV1 187 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 DENND5AQ6IQ26 1287 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 TRMT10BQ6PF06 316 aaKnown RBP9.6□□□□□ -0.87
SF3B1-211ENST00000487698 KDELC1Q6UW63 502 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF783Q6ZMS7 281 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 TAOK1Q7L7X3 1001 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 CPXM2Q8N436 756 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 LEMD2Q8NC56 503 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 ARRDC2Q8TBH0 407 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 TCEAL4Q96EI5 215 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 MRGPRX2Q96LB1 330 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 TBL1YQ9BQ87 522 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 CAPS2Q9BXY5 557 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 NT5MQ9NPB1 228 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 SMYD2Q9NRG4 433 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 VPS45Q9NRW7 570 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 BFARQ9NZS9 450 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 CFAP97Q9P2B7 532 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 LSM7Q9UK45 103 aaKnown RBP9.6□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF510Q9Y2H8 683 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 LAMA3Q16787 3333 aa9.6□□□□□ -0.87
SF3B1-211ENST00000487698 CXorf49A8MYA2 514 aaPredicted RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 LEFTY2O00292 366 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 KDELR3O43731 214 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 PAPLNO95428 1278 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 RHOP08100 348 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 RHOCP08134 193 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 CREB1P16220 341 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 PBX2P40425 430 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 MDH1P40925 334 aaKnown RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 NIPAL4Q0D2K0 466 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 FRG1Q14331 258 aaKnown RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 IHHQ14623 411 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 PRSS36Q5K4E3 855 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 CASC4Q6P4E1 433 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 TMEM135Q86UB9 458 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF354CQ86Y25 554 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 CCDC117Q8IWD4 279 aaPredicted RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 IPMKQ8NFU5 416 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 NSMCE1Q8WV22 266 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF707Q96C28 371 aaPredicted RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 APOL2Q9BQE5 337 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 IL22Q9GZX6 179 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ATP13A1Q9HD20 1204 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZDHHC7Q9NXF8 308 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 HCFC2Q9Y5Z7 792 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 A6NNZ2 444 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 MUSKO15146 869 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 TBL1XO60907 577 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 XYLBO75191 536 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 NEBLO76041 1014 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 LUC7L3O95232 432 aaKnown RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 GLDCP23378 1020 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ETFBP38117 255 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 MSH2P43246 934 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 OXCT1P55809 520 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 MAXP61244 160 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 GUCY1A3Q02108 690 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 DSC2Q02487 901 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 TEAD2Q15562 447 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 TUBB8Q3ZCM7 444 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 CERCAMQ5T4B2 595 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 GPR158Q5T848 1215 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF449Q6P9G9 518 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 RANBP10Q6VN20 620 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ADGRD2Q7Z7M1 963 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 LRRC6Q86X45 466 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 BBS7Q8IWZ6 715 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 SRRM1Q8IYB3 904 aaKnown RBP9.59□□□□□ -0.87
SF3B1-211ENST00000487698 CMTM8Q8IZV2 173 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 DNAAF3Q8N9W5 541 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 TTC17Q96AE7 1141 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 FICDQ9BVA6 458 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 PRKD2Q9BZL6 878 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 CDH23Q9H251 3354 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms