RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 MSI1O43347 362 aaKnown RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 STAU1O95793 577 aaKnown RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 RECQLP46063 649 aaPredicted RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 LEPRP48357 1165 aaKnown RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 ZNF699Q32M78 642 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 CEP135Q66GS9 1140 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 XYLT1Q86Y38 959 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 HJURPQ8NCD3 748 aaPredicted RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 RASSF8Q8NHQ8 419 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 PCDH19Q8TAB3 1148 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 FRS2Q8WU20 508 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 SCG3Q8WXD2 468 aaKnown RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 STARD8Q92502 1023 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 SRRTQ9BXP5 876 aaKnown RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 CYP4F12Q9HCS2 524 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 RRN3Q9NYV6 651 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 GPR34Q9UPC5 381 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 NAALADL1Q9UQQ1 740 aa12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 HBS1LQ9Y450 684 aaKnown RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 MRPS18BQ9Y676 258 aaKnown RBP12.49□□□□□ -0.41
ATPAF1-205ENST00000487193 KPNA3O00505 521 aaPredicted RBP12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 FPGTO14772 594 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 STX6O43752 255 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 REC8O95072 547 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 NADKO95544 446 aaPredicted RBP12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 LATS1O95835 1130 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 MC1RQ01726 317 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 NR6A1Q15406 480 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 DCAF6Q58WW2 860 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 FAM133BQ5BKY9 247 aaKnown RBP12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 RNF139Q8WU17 664 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 EDEM1Q92611 657 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 ART4Q93070 314 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 MFRPQ9BY79 579 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 RDH14Q9HBH5 336 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 LUZP4Q9P127 313 aa12.48□□□□□ -0.41
ATPAF1-205ENST00000487193 TYW5A2RUC4 315 aaKnown RBP12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 IRAK2O43187 625 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 RFPL1O75677 317 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 UBA7P41226 1012 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 SLC11A2P49281 568 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 TESK1Q15569 626 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 MAP9Q49MG5 647 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 TMEM259Q4ZIN3 620 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 SPNS3Q6ZMD2 512 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 KDELC2Q7Z4H8 507 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 OR6C4Q8NGE1 309 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 EFHD1Q9BUP0 239 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 DUSP16Q9BY84 665 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 OLA1Q9NTK5 396 aaKnown RBP12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 SLC39A1Q9NY26 324 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 PCDHGA3Q9Y5H0 932 aa12.47□□□□□ -0.41
ATPAF1-205ENST00000487193 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 PRSS44E7EML9 344 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 MCF2LO15068 1137 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 ACSL4O60488 711 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 SORBS2O94875 1100 aaKnown RBP12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 THOP1P52888 689 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 CCDC15Q0P6D6 951 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 BIRC3Q13489 604 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 AMZ1Q400G9 498 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 NADSYN1Q6IA69 706 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 Q6ZVU0 165 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 SPRED1Q7Z699 444 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 PIM3Q86V86 326 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 NRSN1Q8IZ57 195 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 NLGN4XQ8N0W4 816 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 NLGN4YQ8NFZ3 816 aaPredicted RBP12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 LARP4BQ92615 738 aaKnown RBP12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 TWNKQ96RR1 684 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 DYRK4Q9NR20 520 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 PILRAQ9UKJ1 303 aa12.46□□□□□ -0.41
ATPAF1-205ENST00000487193 PRRC2CQ9Y520 2896 aaKnown RBP12.46□□□□□ -0.42
ATPAF1-205ENST00000487193 M0QYT0 321 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 RNF103O00237 685 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 KRT86O43790 486 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 DNAJB5O75953 348 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 LUC7L3O95232 432 aaKnown RBP12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 CTSLP07711 333 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 CTSEP14091 401 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 TRIM21P19474 475 aaKnown RBP12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 PDCP20941 246 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 MAP4P27816 1152 aaKnown RBP12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 RPS21P63220 83 aaKnown RBP12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 PPARDQ03181 441 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 SGCGQ13326 291 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 ARHGEF7Q14155 803 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 ERV3-1Q14264 604 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 PSMD6Q15008 389 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 ANKRD1Q15327 319 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 ELOCQ15369 112 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 DLG2Q15700 870 aa12.45□□□□□ -0.42
ATPAF1-205ENST00000487193 SNRNP35Q16560 246 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms