RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 GLRBP48167 497 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 IL23RQ5VWK5 629 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 OLFML2BQ68BL8 750 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 ZC3HC1Q86WB0 502 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 CHERPQ8IWX8 916 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 FAM156AQ8NDB6 213 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 SLC2A14Q8TDB8 520 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 C18orf25Q96B23 403 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 NPY6RQ99463 290 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 MLPHQ9BV36 600 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 GBA3Q9H227 469 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PDGFCQ9NRA1 345 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 SNTG2Q9NY99 539 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 LMCD1Q9NZU5 365 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 EPS15L1Q9UBC2 864 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 RALGAPA2Q2PPJ7 1873 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 C7orf72A4D263 438 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 GOLGA8TH3BQL2 631 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 M0QYT0 321 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PHGDHO43175 533 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 DLX3O60479 287 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 TRMUO75648 421 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 CNMDO75829 334 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 HSPA1AP0DMV8 641 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 HSPA1BP0DMV9 641 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 TPH1P17752 444 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 CDH2P19022 906 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 SAT1P21673 171 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 NMBRP28336 390 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 NOS2P35228 1153 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PGGT1BP53609 377 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PPIDQ08752 370 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 ADIGQ0VDE8 80 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 SLC12A1Q13621 1099 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PTK2BQ14289 1009 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 USP10Q14694 798 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 DCAF4L1Q3SXM0 396 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 C9orf57Q5W0N0 161 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PDZD4Q76G19 769 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 FSTL5Q8N475 847 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 KCTD4Q8WVF5 259 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 LZICQ8WZA0 190 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 ATP6V1E2Q96A05 226 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 EME1Q96AY2 570 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 ASB9Q96DX5 294 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 SNX27Q96L92 541 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 ZNF597Q96LX8 424 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 FAM210AQ96ND0 272 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 APOL2Q9BQE5 337 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 DNAI2Q9GZS0 605 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 RHOJQ9H4E5 214 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 NSMCE4AQ9NXX6 385 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 UTP6Q9NYH9 597 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 RNF11Q9Y3C5 154 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 AP4S1Q9Y587 144 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 AK5Q9Y6K8 562 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 SRCAPQ6ZRS2 3230 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 FAM72CH0Y354 149 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 XPO1O14980 1071 aaKnown RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 LGALS2P05162 132 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 C8BP07358 591 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 COL6A2P12110 1019 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 ERCC2P18074 760 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 PSMD8P48556 350 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 TXNL4AP83876 142 aaKnown RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 NME3Q13232 169 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 FAM72AQ5TYM5 149 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 FAM72DQ6L9T8 149 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 LRRC8EQ6NSJ5 796 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 PIGZQ86VD9 579 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 FAM72BQ86X60 149 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 CENPLQ8N0S6 344 aaPredicted RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 KDM1BQ8NB78 822 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 TSPAN14Q8NG11 270 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 ZSCAN18Q8TBC5 510 aaPredicted RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 ITFG2Q969R8 447 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 MAELQ96JY0 434 aaKnown RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 APBA2Q99767 749 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 HAUS8Q9BT25 410 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 COQ10BQ9H8M1 238 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 SUCOQ9UBS9 1254 aaKnown RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 PCDHGA7Q9Y5G6 932 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 DNAJC25-GNG10A0A024R161 153 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 A0A1B0GTW7 788 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 C9IYK1 514 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 SDHDO14521 159 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 USP2O75604 605 aaPredicted RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 ZNF23P17027 643 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 PTPN1P18031 435 aaKnown RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 DNAJB1P25685 340 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 AVPR1AP37288 418 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 PSME3P61289 254 aa12.38□□□□□ -0.43
COL3A1-206ENST00000487010 TRIM25Q14258 630 aaKnown RBP12.38□□□□□ -0.43
COL3A1-206ENST00000487010 TTLL4Q14679 1199 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms