RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 FTH1P19P0C7X4 201 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 GHRP10912 638 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 TYRP14679 529 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 CDK11BP21127 795 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 KIF5BP33176 963 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 TCF7P36402 384 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 GNAQP50148 359 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 LINC00205P59089 165 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 HYAL1Q12794 435 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 PPFIA1Q13136 1202 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 CAMK1Q14012 370 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 BTG3Q14201 252 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 RABEP1Q15276 862 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 HERC4Q5GLZ8 1057 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 FBXO47Q5MNV8 452 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 MARCH8Q5T0T0 291 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 FAM160B1Q5W0V3 765 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 ICE2Q659A1 982 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 USP17L6PQ6QN14 398 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 WDR53Q7Z5U6 358 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 TMTC2Q8N394 836 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 PNLDC1Q8NA58 520 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 CTCFLQ8NI51 663 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 DNAJB3Q8WWF6 145 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 GLG1Q92896 1179 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 PPP2R3CQ969Q6 453 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 RRP36Q96EU6 259 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 FTHL17Q9BXU8 183 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 TTYH3Q9C0H2 523 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 VPS16Q9H269 839 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 PSTPIP2Q9H939 334 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 CD207Q9UJ71 328 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 TUBE1Q9UJT0 475 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 UBIAD1Q9Y5Z9 338 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 PLXNA4Q9HCM2 1894 aa4.47□□□□□ -1.69
SNRNP40-205ENST00000486941 KDM3AQ9Y4C1 1321 aa4.46□□□□□ -1.69
SNRNP40-205ENST00000486941 FAM186AA6NE01 2351 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 M0QZ92 97 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 QSOX1O00391 747 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 TBX10O75333 385 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 STAG3L1P0CL83 205 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 CALM1P0DP23 149 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 CALM2P0DP24 149 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 CALM3P0DP25 149 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 CHMLP26374 656 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 LILRA4P59901 499 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 MRPS6P82932 125 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 AMPD3Q01432 767 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 SP4Q02446 784 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 COASYQ13057 564 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 PTPN21Q16825 1174 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 Q4G0T1 1027 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 TTC22Q5TAA0 569 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 PLPPR4Q7Z2D5 763 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 MB21D2Q8IYB1 491 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 NME8Q8N427 588 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 SRBD1Q8N5C6 995 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 SPPL3Q8TCT6 385 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 PIBF1Q8WXW3 757 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 MAP4K1Q92918 833 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 MSLNLQ96KJ4 702 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 LENG8Q96PV6 779 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 NELL2Q99435 816 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 SLC13A1Q9BZW2 595 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 LY9Q9HBG7 655 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 SEC63Q9UGP8 760 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 PADI3Q9ULW8 664 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 TBC1D30Q9Y2I9 924 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 C5orf42Q9H799 3197 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 SPTBN4Q9H254 2564 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 NFASCO94856 1347 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 IGSF9BQ9UPX0 1349 aa4.46□□□□□ -1.7
SNRNP40-205ENST00000486941 ZFHX2Q9C0A1 2572 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 FSD2A1L4K1 749 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 A1L4Q6 167 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 LOC730098B7Z3J9 87 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 hCG_1984214I3L0E3 225 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 LINC01565O15544 149 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 SCG2P13521 617 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 DNAJB1P25685 340 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 MARK3P27448 753 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 CD52P31358 61 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 MCM5P33992 734 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 LIFRP42702 1097 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 SLC26A2P50443 739 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 IGBP1P78318 339 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 NKX6-1P78426 367 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 UBE3AQ05086 875 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 PLCB4Q15147 1175 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 ODR4Q5SWX8 454 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 ARHGAP40Q5TG30 622 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 CASC1Q6TDU7 716 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 ZNF517Q6ZMY9 492 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 Q6ZWC4 215 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 SMRP1Q8NCR6 262 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 EXOC6Q8TAG9 804 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 POF1BQ8WVV4 589 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 R3HDM4Q96D70 268 aa4.45□□□□□ -1.7
SNRNP40-205ENST00000486941 PCYT2Q99447 389 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms