RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 INSRRP14616 1297 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 CDH13P55290 713 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 DCTN2Q13561 401 aaKnown RBP12.58□□□□□ -0.4
HSPG2-211ENST00000486901 CSHL1Q14406 222 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 LPIN1Q14693 890 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 NEDD8Q15843 81 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 OGFOD2Q6N063 350 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 POTEAQ6S8J7 498 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 PARP8Q8N3A8 854 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 RNF139Q8WU17 664 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 SLC2A6Q9UGQ3 507 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 SORCS3Q9UPU3 1222 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 MYCP01106 439 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 NFKB1P19838 968 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 GMPSP49915 693 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 SERPINB8P50452 374 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 PSME3P61289 254 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 MXD4Q14582 209 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 ZBTB49Q6ZSB9 765 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 CEP97Q8IW35 865 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 TSNARE1Q96NA8 513 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 BTBD9Q96Q07 612 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 C6orf203Q9P0P8 240 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 PIM2Q9P1W9 311 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 SCN1AP35498 2009 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 PRORSD1PA6NEY8 169 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 MATN2O00339 956 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 NCAM1P13591 858 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 TPSB2P20231 275 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 GLDCP23378 1020 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 PPARGP37231 505 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 LAMC2Q13753 1193 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 TPSAB1Q15661 275 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 PCSK7Q16549 785 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 DBN1Q16643 649 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 GPR107Q5VW38 600 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 FAM35AQ86V20 835 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 KLHL23Q8NBE8 558 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 IPMKQ8NFU5 416 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 MRPS26Q9BYN8 205 aaKnown RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 EFCAB1Q9HAE3 211 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 RRN3Q9NYV6 651 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 RSL24D1Q9UHA3 163 aaKnown RBP12.57□□□□□ -0.4
HSPG2-211ENST00000486901 DMTF1Q9Y222 760 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 COL4A5P29400 1685 aa12.57□□□□□ -0.4
HSPG2-211ENST00000486901 TTC24A2A3L6 582 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 KPNA7A9QM74 516 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 B4GAT1O43505 415 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 DLX3O60479 287 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 KCNA5P22460 613 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 PLA2G4EQ3MJ16 856 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 CANT1Q8WVQ1 401 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 RTP4Q96DX8 246 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 RBM38Q9H0Z9 239 aaKnown RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 PDZD7Q9H5P4 517 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 NUDT5Q9UKK9 219 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 DSEQ9UL01 958 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 RNF103-CHMP3A0A140T963 221 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 ARHGAP10A1A4S6 786 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 TCAF2A6NFQ2 919 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 SOCS2O14508 198 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 CASQ2O14958 399 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 GPC4O75487 556 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 EMP3P54852 163 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 CNSTQ6PJW8 725 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 TIFABQ6ZNK6 161 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 FBXL20Q96IG2 436 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 EEF2KO00418 725 aaKnown RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 ZSCAN9O15535 394 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 DENRO43583 198 aaKnown RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 PMPCBO75439 489 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 SBK3P0C264 359 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 TXNP10599 105 aaKnown RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 SLC7A2P52569 658 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 LIMK2P53671 638 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 CTBSQ01459 385 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 ZBTB17Q13105 803 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 FUT11Q495W5 492 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 RWDD4Q6NW29 188 aaKnown RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 KLC3Q6P597 504 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 ARHGAP36Q6ZRI8 547 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 GIPC3Q8TF64 312 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 SLC35F5Q8WV83 523 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 ELMO2Q96JJ3 720 aa12.56□□□□□ -0.4
HSPG2-211ENST00000486901 GCOM2Q9BZD3 368 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 TSR3Q9UJK0 312 aaKnown RBP12.56□□□□□ -0.4
HSPG2-211ENST00000486901 ERCC2P18074 760 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 TKTP29401 623 aaKnown RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 CHRNA4P43681 627 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 RBP5P82980 135 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 CD300CQ08708 224 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 ZIK1Q3SY52 487 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 NPWQ8N729 165 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 GPR20Q99678 358 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 CPNE1Q99829 537 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms