RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SLC6A18Q96N87 628 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 ACE2Q9BYF1 805 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 MAGEH1Q9H213 219 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 GAREM1Q9H706 876 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 OSGEPQ9NPF4 335 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 MYO1AQ9UBC5 1043 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 IL36AQ9UHA7 158 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 SARDHQ9UL12 918 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 PPM1HQ9ULR3 514 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 FZD10Q9ULW2 581 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 AP4E1Q9UPM8 1137 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 FCF1Q9Y324 198 aaKnown RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 LUC7L2Q9Y383 392 aaKnown RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 A0A1W2PPC4 97 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 DDX3XO00571 662 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHMP3-208ENST00000486404 GIPC1O14908 333 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 PLRG1O43660 514 aaKnown RBP13.15□□□□□ -0.3
CHMP3-208ENST00000486404 PRPSAP2O60256 369 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 SERPING1P05155 500 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 HTR7P34969 479 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 DRD3P35462 400 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 ACVRL1P37023 503 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 CCR5P51681 352 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 PPP2CBP62714 309 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 RACK1P63244 317 aaKnown RBP13.15□□□□□ -0.3
CHMP3-208ENST00000486404 PPP2CAP67775 309 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 ARF5P84085 180 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 OGDHQ02218 1023 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 SLC20A2Q08357 652 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 SLC14A1Q13336 389 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 HLA-BQ31612 363 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 N4BP2L1Q5TBK1 243 aaPredicted RBP13.15□□□□□ -0.3
CHMP3-208ENST00000486404 AGBL4Q5VU57 503 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 DNAAF5Q86Y56 855 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 SYN2Q92777 582 aaPredicted RBP13.15□□□□□ -0.3
CHMP3-208ENST00000486404 TM6SF2Q9BZW4 377 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 ZDHHC6Q9H6R6 413 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 NEU3Q9UQ49 428 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 ANKRD6Q9Y2G4 727 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 ANKRD36A6QL64 1941 aa13.15□□□□□ -0.3
CHMP3-208ENST00000486404 DOCK9Q9BZ29 2069 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 ZSCAN5CA6NGD5 496 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 UPK3BL1B0FP48 263 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 EIF3CLB5ME19 914 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 UPK3BL2E5RIL1 263 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 EEF2KO00418 725 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 DAPK3O43293 454 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 ZMPSTE24O75844 475 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 CTSLP07711 333 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 TPM1P09493 284 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 MAT2AP31153 395 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 PBX1P40424 430 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 CCT8P50990 548 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 CCNHP51946 323 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 KIF19Q2TAC6 998 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 SETMARQ53H47 684 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 NAPEPLDQ6IQ20 393 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 DPY19L3Q6ZPD9 716 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 PRPF39Q86UA1 669 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 CHST14Q8NCH0 376 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 TMIEQ8NEW7 156 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 C1orf216Q8TAB5 229 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 ARHGEF2Q92974 986 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 SERAC1Q96JX3 654 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 EIF3CQ99613 913 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 XPO4Q9C0E2 1151 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 KDM4CQ9H3R0 1056 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 PREBQ9HCU5 417 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 NDFIP2Q9NV92 336 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 GPATCH2LQ9NWQ4 482 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 DONSONQ9NYP3 566 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 PCSK1NQ9UHG2 260 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 ANGPTL2Q9UKU9 493 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 CAPN11Q9UMQ6 739 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 FNDC3AQ9Y2H6 1198 aaKnown RBP13.14□□□□□ -0.31
CHMP3-208ENST00000486404 PCDHB9Q9Y5E1 797 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.315e-7■□□□□ 8.3
CHMP3-208ENST00000486404 SLCO1B1Q9Y6L6 691 aa13.14□□□□□ -0.31
CHMP3-208ENST00000486404 CXorf51AA0A1B0GTR3 108 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 BUB1O43683 1085 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 LEFTY1O75610 366 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 GYPCP04921 128 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 NUDT1P36639 197 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 SNRPD1P62314 119 aaKnown RBP13.13□□□□□ -0.31
CHMP3-208ENST00000486404 SIM1P81133 766 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-208ENST00000486404 FOXC1Q12948 553 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 HNRNPDQ14103 355 aaKnown RBP13.13□□□□□ -0.31
CHMP3-208ENST00000486404 TRIM14Q14142 442 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 INAVAQ3KP66 663 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 PARP15Q460N3 678 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 CARD16Q5EG05 197 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms