RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PCDH20Q8N6Y1 951 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 CHST14Q8NCH0 376 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 SETD7Q8WTS6 366 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 ARHGEF2Q92974 986 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 SERAC1Q96JX3 654 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 MAGEH1Q9H213 219 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 TNKS2Q9H2K2 1166 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 CBX8Q9HC52 389 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 AASDHPPTQ9NRN7 309 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 ARHGAP20Q9P2F6 1191 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 PCOLCE2Q9UKZ9 415 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 NEU3Q9UQ49 428 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 A0A1W2PR77 199 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 TMCO5BA8MYB1 307 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 KPNA3O00505 521 aaPredicted RBP18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 WNT9AO14904 365 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 TRIM16O95361 564 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 CD160O95971 181 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 WNT1P04628 370 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 GZMAP12544 262 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 DESP17661 470 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 NUDT1P36639 197 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 AIF1P55008 147 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 TPM4P67936 248 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 MAMLD1Q13495 774 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 CARD16Q5EG05 197 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 ARSIQ5FYB1 569 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 EFHC2Q5JST6 749 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 DPY19L3Q6ZPD9 716 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 ZNF571Q7Z3V5 609 aaPredicted RBP18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 TRIM69Q86WT6 500 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 PYROXD2Q8N2H3 581 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 TTYH3Q9C0H2 523 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 PREBQ9HCU5 417 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 DYRK4Q9NR20 520 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 PARVAQ9NVD7 372 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 IL36AQ9UHA7 158 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 FZD10Q9ULW2 581 aa18.79■□□□□ 0.6
PRPF40A-209ENST00000486100 PCNX2A6NKB5 2137 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 H0Y8X5 98 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 FLRT2O43155 660 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 RAMP2O60895 175 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 TOP3BO95985 862 aaKnown RBP18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 DNA2P51530 1060 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 TAS2R38P59533 333 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 KLHL30Q0D2K2 578 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 POLD3Q15054 466 aaPredicted RBP18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 SLC45A4Q5BKX6 768 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 FIGNQ5HY92 759 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 PIP5KL1Q5T9C9 394 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 PLEKHA7Q6IQ23 1121 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 NEK5Q6P3R8 708 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 GLRX5Q86SX6 157 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 LUZP1Q86V48 1076 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 PLPP6Q8IY26 295 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 RHBDD1Q8TEB9 315 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 ISG20Q96AZ6 181 aaKnown RBP18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 ARRDC3Q96B67 414 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 HEPHQ9BQS7 1158 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 SCNM1Q9BWG6 230 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 HPCAL4Q9UM19 191 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 DMTF1Q9Y222 760 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 FCF1Q9Y324 198 aaKnown RBP18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 ACTL7AQ9Y615 435 aa18.78■□□□□ 0.6
PRPF40A-209ENST00000486100 RNF103O00237 685 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 PCDHGA12O60330 932 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 LEFTY1O75610 366 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 FTLP02792 175 aaPredicted RBP18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 SPINK2P20155 84 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 EPHB2P29323 1055 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 MAT2AP31153 395 aaKnown RBP18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 CCT8P50990 548 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 GEMIN4P57678 1058 aaKnown RBP18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 FANCCQ00597 558 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 OGDHQ02218 1023 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 E4F1Q66K89 784 aaPredicted RBP18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 NAPEPLDQ6IQ20 393 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 ERN2Q76MJ5 926 aaKnown RBP18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 RTL3Q8N8U3 475 aaKnown RBP18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 PPP1R16AQ96I34 528 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 HDAC8Q9BY41 377 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 WASF2Q9Y6W5 498 aa18.77■□□□□ 0.6
PRPF40A-209ENST00000486100 A0A1B0GTQ1 180 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 WASH4PA8MWX3 477 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 TLR4O00206 839 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 DDX3XO00571 662 aaKnown RBP eCLIP18.76■□□□□ 0.591e-15■■□□□ 12.1
PRPF40A-209ENST00000486100 KDELR3O43731 214 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 CREB3O43889 395 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 RNGTTO60942 597 aaKnown RBP18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 PTMSP20962 102 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 CCNHP51946 323 aaPredicted RBP18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 MFSD2AQ8NA29 543 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 BAHD1Q8TBE0 780 aaPredicted RBP18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 GRIN3AQ8TCU5 1115 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 ELF4Q99607 663 aaPredicted RBP18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 CDC6Q99741 560 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 EPAS1Q99814 870 aa18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 HECAQ9UBI9 543 aaPredicted RBP18.76■□□□□ 0.59
PRPF40A-209ENST00000486100 TMEM191CA6NGB0 347 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms