RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PLRG1O43660 514 aaKnown RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 RNGTTO60942 597 aaKnown RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 LRIG2O94898 1065 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 CD160O95971 181 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 MT-CO1P00395 513 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 SERPINC1P01008 464 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 PRNPP04156 253 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 CFIP05156 583 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 IGHV4-34P06331 123 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 MYBL1P10243 752 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 CD59P13987 128 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 DESP17661 470 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 RRM1P23921 792 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 PMLP29590 882 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 HNRNPH3P31942 346 aaKnown RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 CHRNA3P32297 505 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 HCAR3P49019 387 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 STK19P49842 368 aaPredicted RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 ZNF135P52742 658 aaPredicted RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 UBASH3AP57075 661 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 GEMIN4P57678 1058 aaKnown RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 YBEYP58557 167 aaPredicted RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 RPL7AP62424 266 aaKnown RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 ZBED6P86452 979 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 BNC1Q01954 994 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 KLHL30Q0D2K2 578 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 OVGP1Q12889 678 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 TEAD4Q15561 434 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 ACCSLQ4AC99 568 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 INO80DQ53TQ3 878 aaPredicted RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 DNAJC24Q6P3W2 148 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 ZNF571Q7Z3V5 609 aaPredicted RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 GLRX5Q86SX6 157 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 IQCHQ86VS3 1027 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 ZSCAN30Q86W11 494 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 UMODL1-AS1Q8N2C9 162 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 HDDC3Q8N4P3 179 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 MINDY1Q8N5J2 469 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 AADATQ8N5Z0 425 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 PCDH20Q8N6Y1 951 aaKnown RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 OR2A12Q8NGT7 310 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 FAM174AQ8TBP5 190 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 FAM172AQ8WUF8 416 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 CASKIN2Q8WXE0 1202 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 ARHGEF2Q92974 986 aaKnown RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 SKA1Q96BD8 255 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 TBC1D31Q96DN5 1066 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 ERLEC1Q96DZ1 483 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 LRIG1Q96JA1 1093 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 CCDC114Q96M63 670 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 SLC6A16Q9GZN6 736 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 HAUS4Q9H6D7 363 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 ARHGAP20Q9P2F6 1191 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 NEU3Q9UQ49 428 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 DMTF1Q9Y222 760 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 EPG5Q9HCE0 2579 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 NYNRINQ9P2P1 1898 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 CACNA1BQ00975 2339 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 A0A1W2PP55 124 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 A0A1W2PR77 199 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 FAM72CH0Y354 149 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 GOLGA6L19H0YKK7 550 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CCP110O43303 1012 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 SMAD6O43541 496 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 KDELR3O43731 214 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 PCDHGA12O60330 932 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 SNAP91O60641 907 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 RNASEH2AO75792 299 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 TRIM16O95361 564 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CER1O95813 267 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 IL1BP01584 269 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 FTLP02792 175 aaPredicted RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 SNRPBP14678 240 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 PCK1P35558 622 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CTSKP43235 329 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CSNK1EP49674 416 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 ASIC2Q16515 512 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CDO1Q16878 200 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 ZNF423Q2M1K9 1284 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 RAB6CQ53S08 254 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CARD16Q5EG05 197 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 ERMARDQ5T6L9 678 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 FAM72AQ5TYM5 149 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 HGSNATQ68CP4 663 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 FAM72DQ6L9T8 149 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 DCUN1D2Q6PH85 259 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 NCEH1Q6PIU2 408 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 FAM124AQ86V42 546 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 LUZP1Q86V48 1076 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 TRIM69Q86WT6 500 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 FAM72BQ86X60 149 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 ARFGAP1Q8N6T3 406 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 MFSD2AQ8NA29 543 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 ATP11CQ8NB49 1132 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 HCAR2Q8TDS4 363 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms