RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ACE2Q9BYF1 805 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 CEP44Q9C0F1 390 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 RBSNQ9H1K0 784 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 NHEJ1Q9H9Q4 299 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 FSCN3Q9NQT6 498 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ZNF212Q9UDV6 495 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 SERGEFQ9UGK8 458 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 IL36AQ9UHA7 158 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 FCF1Q9Y324 198 aaKnown RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 PTPRZ1P23471 2315 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-205ENST00000485746 LNP1A1A4G5 178 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-205ENST00000485746 ARHGAP42A6NI28 874 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 TMEM110-MUSTN1A8MSY1 372 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 WASH4PA8MWX3 477 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 PLK4O00444 970 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 BCAT2O15382 392 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-205ENST00000485746 ZMPSTE24O75844 475 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 GJC1P36383 396 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 ZNF135P52742 658 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-205ENST00000485746 LIMK1P53667 647 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 ARF5P84085 180 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 KRT81Q14533 505 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 TEAD4Q15561 434 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 SMTNL2Q2TAL5 461 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 PARP15Q460N3 678 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 KCNT1Q5JUK3 1230 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 CHST14Q8NCH0 376 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 TMIEQ8NEW7 156 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 OR2A12Q8NGT7 310 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 GRIN3AQ8TCU5 1115 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 DNASE2BQ8WZ79 361 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 HMCESQ96FZ2 354 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 CELF6Q96J87 481 aaKnown RBP12.76□□□□□ -0.37
PTCD1-205ENST00000485746 CHP1Q99653 195 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 HEPHQ9BQS7 1158 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 ZDHHC6Q9H6R6 413 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 DLL3Q9NYJ7 618 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 HECAQ9UBI9 543 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-205ENST00000485746 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 PPM1HQ9ULR3 514 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 ACTL7AQ9Y615 435 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 PIEZO1Q92508 2521 aa12.76□□□□□ -0.37
PTCD1-205ENST00000485746 DFFAO00273 331 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 CD27P26842 260 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 NDST2P52849 883 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 SNRPD1P62314 119 aaKnown RBP12.75□□□□□ -0.37
PTCD1-205ENST00000485746 RAD51Q06609 339 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 CNTN1Q12860 1018 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 SEMA3BQ13214 749 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 PEAR1Q5VY43 1037 aaPredicted RBP12.75□□□□□ -0.37
PTCD1-205ENST00000485746 DPY19L3Q6ZPD9 716 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 RFX8Q6ZV50 586 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 PRPF39Q86UA1 669 aaKnown RBP12.75□□□□□ -0.37
PTCD1-205ENST00000485746 ISG20Q96AZ6 181 aaKnown RBP12.75□□□□□ -0.37
PTCD1-205ENST00000485746 SKA1Q96BD8 255 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 BIRC7Q96CA5 298 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 PACSIN1Q9BY11 444 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTCD1-205ENST00000485746 SPTLC3Q9NUV7 552 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 UVRAGQ9P2Y5 699 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 UBA2Q9UBT2 640 aaPredicted RBP12.75□□□□□ -0.37
PTCD1-205ENST00000485746 LCMT1Q9UIC8 334 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 NEU3Q9UQ49 428 aa12.75□□□□□ -0.37
PTCD1-205ENST00000485746 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.75□□□□□ -0.37
PTCD1-205ENST00000485746 CXorf51AA0A1B0GTR3 108 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 KRIT1O00522 736 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 SLC7A4O43246 635 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 OPHN1O60890 802 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 LEFTY1O75610 366 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 TMCC1O94876 653 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 IGSF6O95976 241 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 RARAP10276 462 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 C7P10643 843 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 ERCC2P18074 760 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 CSNK1EP49674 416 aaKnown RBP12.74□□□□□ -0.37
PTCD1-205ENST00000485746 PAPOLAP51003 745 aaKnown RBP12.74□□□□□ -0.37
PTCD1-205ENST00000485746 ZNF75DP51815 510 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 CCNHP51946 323 aaPredicted RBP12.74□□□□□ -0.37
PTCD1-205ENST00000485746 METAP1P53582 386 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 ADPRHP54922 357 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 C21orf59P57076 290 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 RHOAP61586 193 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 TBX2Q13207 712 aaPredicted RBP12.74□□□□□ -0.37
PTCD1-205ENST00000485746 SERINC3Q13530 473 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 UMODL1-AS1Q8N2C9 162 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 NIPA2Q8N8Q9 360 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 CASKIN2Q8WXE0 1202 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 ZDHHC5Q9C0B5 715 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 KDM4CQ9H3R0 1056 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 NOL6Q9H6R4 1146 aaKnown RBP12.74□□□□□ -0.37
PTCD1-205ENST00000485746 SP110Q9HB58 689 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 CAPN10Q9HC96 672 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 AASDHPPTQ9NRN7 309 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
PTCD1-205ENST00000485746 GPR179Q6PRD1 2367 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms