RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	DISP2	A7MBM2	1401 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	FSD2	A1L4K1	749 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	DYTN	A2CJ06	578 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	WDR27	A2RRH5	827 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	PI4KAP2	A4QPH2	592 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	AGAP5	A6NIR3	686 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	AP4M1	O00189	453 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	CCNDBP1	O95273	360 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	RHO	P08100	348 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	NR2F6	P10588	404 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	ALAD	P13716	330 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	ABCD3	P28288	659 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	SLC8A1	P32418	973 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	MCM5	P33992	734 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	ARL3	P36405	182 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	ARHGAP25	P42331	645 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	HTR6	P50406	440 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	RPS6KA3	P51812	740 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	TAS2R50	P59544	299 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	CFHR3	Q02985	330 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	AARS2	Q5JTZ9	985 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	HAUS3	Q68CZ6	603 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	SLC39A5	Q6ZMH5	540 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	KRBA2	Q6ZNG9	492 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	C18orf65	Q6ZTR6	163 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	LINS1	Q8NG48	757 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	RFWD2	Q8NHY2	731 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	ADAMTS18	Q8TE60	1221 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	NCSTN	Q92542	709 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	CUL5	Q93034	780 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	RFK	Q969G6	155 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	MCRS1	Q96EZ8	462 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	MASTL	Q96GX5	879 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	NEUROD6	Q96NK8	337 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	TRMO	Q9BU70	441 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	STN1	Q9H668	368 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	USP29	Q9HBJ7	922 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	DIAPH3	Q9NSV4	1193 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	SERTAD4	Q9NUC0	356 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	POLG2	Q9UHN1	485 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	CD207	Q9UJ71	328 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	HSF4	Q9ULV5	492 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	MAFF	Q9ULX9	164 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	COPG1	Q9Y678	874 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	SIGLEC1	Q9BZZ2	1709 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	ZMYM4	Q5VZL5	1548 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	SH2D7	A6NKC9	451 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	SPTLC2	O15270	562 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	CA12	O43570	354 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	USO1	O60763	962 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	F9	P00740	461 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ACADM	P11310	421 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ALOX12	P18054	663 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	IGFBP2	P18065	325 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	CYP2C18	P33260	490 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	POLD2	P49005	469 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	DIO1	P49895	249 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	RARS	P54136	660 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	FOXL2	P58012	376 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	SET	Q01105	290 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	NUCB1	Q02818	461 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	MAMLD1	Q13495	774 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	EIF4A2	Q14240	407 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	CNGA3	Q16281	694 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	TST	Q16762	297 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024		Q4G0T1	1027 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	FAM69A	Q5T7M9	428 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	C16orf89	Q6UX73	402 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	GSG1L	Q6UXU4	331 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ATF7IP	Q6VMQ6	1270 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	RRM2B	Q7LG56	351 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	CPLX4	Q7Z7G2	160 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ADGRG6	Q86SQ4	1221 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	CHD1L	Q86WJ1	897 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	NGEF	Q8N5V2	710 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ETNPPL	Q8TBG4	499 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	TMEM255B	Q8WV15	326 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	TBC1D5	Q92609	795 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	SAAL1	Q96ER3	474 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	TRMT61A	Q96FX7	289 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	VCPIP1	Q96JH7	1222 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	LYZL4	Q96KX0	146 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	C5orf34	Q96MH7	638 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	SNX18	Q96RF0	628 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	CHCHD6	Q9BRQ6	235 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	FSD1L	Q9BXM9	530 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	TRIM2	Q9C040	744 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	RMI1	Q9H9A7	625 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	DUSP22	Q9NRW4	184 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ABHD10	Q9NUJ1	306 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	GAR1	Q9NY12	217 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	TBC1D14	Q9P2M4	693 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ADAMTS5	Q9UNA0	930 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ICK	Q9UPZ9	632 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	SLC45A1	Q9Y2W3	748 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	PCDHB2	Q9Y5E7	798 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	MSH6	P52701	1360 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	TMEM94	Q12767	1356 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms