RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 FAM90A16PA6NEW6 464 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 FAM90A9PA6NNJ1 464 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 LGALS16A8MUM7 142 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 FAM90A5PA8MXJ8 464 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 LINC01565O15544 149 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 ZNF432O94892 652 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 CBX6O95503 412 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 ZBTB11O95625 1053 aaPredicted RBP4.45□□□□□ -1.7
SMC4-215ENST00000484799 FAM90A15PP0C7V4 464 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 FAM90A14PP0C7W9 464 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 TYK2P29597 1187 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 GOLGA8FQ08AF8 430 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 DHX8Q14562 1220 aaKnown RBP4.45□□□□□ -1.7
SMC4-215ENST00000484799 KRT72Q14CN4 511 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 KRTAP27-1Q3LI81 207 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 TRIM60Q495X7 471 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 GXYLT1Q4G148 440 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 AADACL2Q6P093 401 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 TMEM71Q6P5X7 295 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 PRSS57Q6UWY2 283 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 CUZD1Q86UP6 607 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 SLC44A2Q8IWA5 706 aaPredicted RBP4.45□□□□□ -1.7
SMC4-215ENST00000484799 ATG16L2Q8NAA4 619 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 FAM216AQ8WUB2 273 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 RUBCNQ92622 972 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 KATNAL1Q9BW62 490 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 ACAD9Q9H845 621 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 Q9N2J8 555 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 TMEM248Q9NWD8 314 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 MDFICQ9P1T7 246 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 SEL1LQ9UBV2 794 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 TAGLN3Q9UI15 199 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 PAM16Q9Y3D7 125 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 DAAM1Q9Y4D1 1078 aa4.45□□□□□ -1.7
SMC4-215ENST00000484799 KDM4EB2RXH2 506 aaPredicted RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 IL1AP01583 271 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 SERPINB3P29508 390 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 C21orf33P30042 268 aaPredicted RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 AMTP48728 403 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 TNFAIP2Q03169 654 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 GRAMD1BQ3KR37 738 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 EFHC1Q5JVL4 640 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 C10orf62Q5T681 223 aaPredicted RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 GFI1BQ5VTD9 330 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 ATG9BQ674R7 924 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 C8orf82Q6P1X6 216 aaPredicted RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 USP43Q70EL4 1123 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 RNF144BQ7Z419 303 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 SERPINA11Q86U17 422 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 MYLK4Q86YV6 388 aaPredicted RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 TMC8Q8IU68 726 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 FOXP4Q8IVH2 680 aaPredicted RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 EID2BQ96D98 161 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 TEFMQ96QE5 360 aaKnown RBP4.44□□□□□ -1.7
SMC4-215ENST00000484799 FRG2BQ96QU4 278 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 CLPBQ9H078 707 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 KLHL31Q9H511 634 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 KLQ9UEF7 1012 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 DAPP1Q9UN19 280 aa4.44□□□□□ -1.7
SMC4-215ENST00000484799 EVPLQ92817 2033 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 A0A096LPK6 155 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 HMX3A6NHT5 357 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 HEXIM1O94992 359 aaKnown RBP4.43□□□□□ -1.7
SMC4-215ENST00000484799 SETSIPP0DME0 302 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 RBM5P52756 815 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMC4-215ENST00000484799 ICA1Q05084 483 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 OTUD3Q5T2D3 398 aaPredicted RBP4.43□□□□□ -1.7
SMC4-215ENST00000484799 TYW3Q6IPR3 259 aaKnown RBP4.43□□□□□ -1.7
SMC4-215ENST00000484799 RRAGAQ7L523 313 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 RBM23Q86U06 439 aaKnown RBP4.43□□□□□ -1.7
SMC4-215ENST00000484799 WDR5BQ86VZ2 330 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 CLIP4Q8N3C7 705 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 NR4A3Q92570 626 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 GOLGA1Q92805 767 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 IGSF21Q96ID5 467 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 TXNDC15Q96J42 360 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 INPP4AQ96PE3 977 aaPredicted RBP4.43□□□□□ -1.7
SMC4-215ENST00000484799 FRMD8Q9BZ67 464 aaPredicted RBP4.43□□□□□ -1.7
SMC4-215ENST00000484799 LHPPQ9H008 270 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 TAF1DQ9H5J8 278 aaPredicted RBP4.43□□□□□ -1.7
SMC4-215ENST00000484799 PLCB1Q9NQ66 1216 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 OCIAD1Q9NX40 245 aa4.43□□□□□ -1.7
SMC4-215ENST00000484799 TRIP12Q14669 1992 aaPredicted RBP4.42□□□□□ -1.7
SMC4-215ENST00000484799 DDTLA6NHG4 134 aaPredicted RBP4.42□□□□□ -1.7
SMC4-215ENST00000484799 SMTNL1A8MU46 457 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 GRID2O43424 1007 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 KRT38O76015 456 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 DAOP14920 347 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 YWHAQP27348 245 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 DPP6P42658 865 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 GPR12P47775 334 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
SMC4-215ENST00000484799 ERVFC1-1P60608 527 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 COASYQ13057 564 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 PUM3Q15397 648 aaKnown RBP4.42□□□□□ -1.7
SMC4-215ENST00000484799 GALNTL6Q49A17 601 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 SYTL3Q4VX76 610 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 DGAT2L7PQ6IED9 249 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms