RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ISCUQ9H1K1 167 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
MSH5-216ENST00000484309 EBF2Q9HAK2 575 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 IL21RQ9HBE5 538 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 SCINQ9Y6U3 715 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3DA0A087WVF3 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3IA0A087WXS9 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3EA0A087X179 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3KA0A087X1G2 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3FA6NER0 549 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3LB9A6J9 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 ALOX15BO15296 676 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 ZNF821O75541 412 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 RNF8O76064 485 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 CD160O95971 181 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TPM3P06753 285 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3HP0C7X1 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 CD27P26842 260 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 MIPP30301 263 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 MAT2AP31153 395 aaKnown RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 RECQLP46063 649 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 CLCN6P51797 869 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 SEMA3BQ13214 749 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3GQ6DHY5 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3CQ6IPX1 549 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 VPS36Q86VN1 386 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D3Q8IZP1 549 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 RTL3Q8N8U3 475 aaKnown RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 OR6K2Q8NGY2 324 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 SYN2Q92777 582 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 BTBD6Q96KE9 485 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 KCTD15Q96SI1 283 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 ORAI3Q9BRQ5 295 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 KLC2Q9H0B6 622 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 THAP2Q9H0W7 228 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 MAGEH1Q9H213 219 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 NOL6Q9H6R4 1146 aaKnown RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 ARHGAP20Q9P2F6 1191 aa12.53□□□□□ -0.4
MSH5-216ENST00000484309 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.42e-7■□□□□ 10
MSH5-216ENST00000484309 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
MSH5-216ENST00000484309 RASA4BC9J798 803 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 EEF2KO00418 725 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 KCNK3O14649 394 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 WNT9AO14904 365 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 RASA4O43374 803 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 PLRG1O43660 514 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 LRCH4O75427 683 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 LEFTY1O75610 366 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 MYBL1P10243 752 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 TCF4P15884 667 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 GKP32189 559 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 ETFBP38117 255 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 EIF4A3P38919 411 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 AFF3P51826 1226 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 CCNHP51946 323 aaPredicted RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 AIF1P55008 147 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 KIF19Q2TAC6 998 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 ARSIQ5FYB1 569 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 PPP6R3Q5H9R7 873 aaPredicted RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 CCDC122Q5T0U0 273 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 N4BP2L1Q5TBK1 243 aaPredicted RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 PCDH20Q8N6Y1 951 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 IQCDQ96DY2 449 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 HMCESQ96FZ2 354 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 ZDHHC6Q9H6R6 413 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 GAREM1Q9H706 876 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 CATSPERBQ9H7T0 1116 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 MRPL47Q9HD33 250 aaKnown RBP12.52□□□□□ -0.41
MSH5-216ENST00000484309 IL36AQ9UHA7 158 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 HPCAL4Q9UM19 191 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 SNX11Q9Y5W9 270 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 WASF2Q9Y6W5 498 aa12.52□□□□□ -0.41
MSH5-216ENST00000484309 A0A1W2PPC4 97 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 BUB1O43683 1085 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 KDELR3O43731 214 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 GJB3O75712 270 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 PRNPP04156 253 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 ADRB1P08588 477 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 TAS2R38P59533 333 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 TEAD4Q15561 434 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 SMTNL2Q2TAL5 461 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 HLA-BQ31612 363 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 CARD16Q5EG05 197 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 KCNT1Q5JUK3 1230 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 ATXN7L2Q5T6C5 722 aaPredicted RBP12.51□□□□□ -0.41
MSH5-216ENST00000484309 ERMARDQ5T6L9 678 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms