RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PPARGC1AQ9UBK2 798 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 SERGEFQ9UGK8 458 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 ADAMTS1Q9UHI8 967 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 PCDHGA1Q9Y5H4 931 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 HS3ST4Q9Y661 456 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 ASXL3Q9C0F0 2248 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 IGLV3-10A0A075B6K4 115 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 LRRC72A6NJI9 287 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 DRGXA6NNA5 263 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 WNT9AO14904 365 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 MID1O15344 667 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 MFAP3LO75121 409 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 ADCY5O95622 1261 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 C7P10643 843 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 SKILP12757 684 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 CD38P28907 300 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 HTR7P34969 479 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 ADRA1BP35368 520 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF135P52742 658 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 PLK1P53350 603 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 CDH4P55283 916 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 RPS24P62847 133 aaKnown RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 SULT2A1Q06520 285 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 SHBQ15464 509 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 HES3Q5TGS1 186 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 TRNP1Q6NT89 227 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 FBXL22Q6P050 247 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF783Q6ZMS7 281 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 USP30Q70CQ3 517 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 SETD3Q86TU7 594 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 MMAAQ8IVH4 418 aaKnown RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 CARNMT1Q8N4J0 409 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 EMC1Q8N766 993 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 JOSD2Q8TAC2 188 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 FAM172AQ8WUF8 416 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 LMLNQ96KR4 655 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 RPRD1AQ96P16 312 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 FCRL3Q96P31 734 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 MCEEQ96PE7 176 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 RSPH9Q9H1X1 276 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 PRORYQ9H606 182 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 GDF3Q9NR23 364 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 ABHD10Q9NUJ1 306 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 DONSONQ9NYP3 566 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 TAS2R14Q9NYV8 317 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 ARHGAP20Q9P2F6 1191 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 XPO7Q9UIA9 1087 aaKnown RBP10.25□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D30Q9Y2I9 924 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 LAMA5O15230 3695 aa10.25□□□□□ -0.77
CPSF4-213ENST00000484112 ANKRD11Q6UB99 2663 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 TMEM191CA6NGB0 347 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 AKR1B15C9JRZ8 316 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ATXN7O15265 892 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 C1QL1O75973 258 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 SRPRAP08240 638 aaKnown RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 C1SP09871 688 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 TFE3P19532 575 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 SLC8A1P32418 973 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 CSKP41240 450 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 PSMD8P48556 350 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ARRB1P49407 418 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ACADVLP49748 655 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 HDAC4P56524 1084 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ATP11AP98196 1134 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 SFSWAPQ12872 951 aaKnown RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 BNIP3Q12983 259 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 TBX2Q13207 712 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF177Q13360 481 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 CST6Q15828 149 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 SLC18A3Q16572 532 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ALKBH5Q6P6C2 394 aaKnown RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF605Q86T29 641 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 PSTKQ8IV42 348 aaKnown RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF683Q8IZ20 524 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 CCAR2Q8N163 923 aaKnown RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 OR2T34Q8NGX1 318 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 OR14C36Q8NHC7 312 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 SAP25Q8TEE9 199 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF653Q96CK0 615 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 SERAC1Q96JX3 654 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 RBSNQ9H1K0 784 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 DEF6Q9H4E7 631 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 CNOT8Q9UFF9 292 aaKnown RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 VANGL2Q9ULK5 521 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 SCML1Q9UN30 329 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 KNL1Q8NG31 2342 aa10.24□□□□□ -0.77
CPSF4-213ENST00000484112 DSPP15924 2871 aaKnown RBP10.24□□□□□ -0.77
CPSF4-213ENST00000484112 CABIN1Q9Y6J0 2220 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3DA0A087WVF3 549 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3IA0A087WXS9 549 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 A0A087X0T9 212 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3EA0A087X179 549 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3KA0A087X1G2 549 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3FA6NER0 549 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TMCO5BA8MYB1 307 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TTC34A8MYJ7 566 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3LB9A6J9 549 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms