RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 FZD10Q9ULW2 581 aa24.02■■□□□ 1.44
RHBDF1-208ENST00000482904 FNDC3AQ9Y2H6 1198 aaKnown RBP24.02■■□□□ 1.44
RHBDF1-208ENST00000482904 FCF1Q9Y324 198 aaKnown RBP24.02■■□□□ 1.44
RHBDF1-208ENST00000482904 SNX11Q9Y5W9 270 aa24.02■■□□□ 1.44
RHBDF1-208ENST00000482904 SCINQ9Y6U3 715 aa24.02■■□□□ 1.44
RHBDF1-208ENST00000482904 LAMA1P25391 3075 aa24.02■■□□□ 1.44
RHBDF1-208ENST00000482904 CNOT1A5YKK6 2376 aaKnown RBP24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 A0A1W2PQJ5 194 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 DDX3XO00571 662 aaKnown RBP eCLIP24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 PLRG1O43660 514 aaKnown RBP24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 ZMPSTE24O75844 475 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 CTSLP07711 333 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 GZMAP12544 262 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 SIM1P81133 766 aaPredicted RBP24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 BNC1Q01954 994 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 CCDC15Q0P6D6 951 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 PLEKHA7Q6IQ23 1121 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 VPS36Q86VN1 386 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 NAXDQ8IW45 347 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 PCDH20Q8N6Y1 951 aaKnown RBP24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 RTL3Q8N8U3 475 aaKnown RBP24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 CHST14Q8NCH0 376 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 SKA1Q96BD8 255 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 PPP1R16AQ96I34 528 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 ORAI3Q9BRQ5 295 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 KDM4CQ9H3R0 1056 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 TM7SF3Q9NS93 570 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 IFNKQ9P0W0 207 aa24.01■■□□□ 1.43
RHBDF1-208ENST00000482904 SH3BP5O60239 455 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 TPM3P06753 285 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 FOXC1Q12948 553 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 POLD3Q15054 466 aaPredicted RBP24■■□□□ 1.43
RHBDF1-208ENST00000482904 DPY19L3Q6ZPD9 716 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 TMIEQ8NEW7 156 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 CPLX3Q8WVH0 158 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 ARHGEF2Q92974 986 aaKnown RBP24■■□□□ 1.43
RHBDF1-208ENST00000482904 FAM131CQ96AQ9 280 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 IQCDQ96DY2 449 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 SERAC1Q96JX3 654 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24■■□□□ 1.43
RHBDF1-208ENST00000482904 TM6SF2Q9BZW4 377 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 CATSPERBQ9H7T0 1116 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 PCDHB9Q9Y5E1 797 aa24■■□□□ 1.43
RHBDF1-208ENST00000482904 SPAARA0A1B0GVQ0 90 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 ZNF883P0CG24 379 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 MYBL1P10243 752 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 MAT2AP31153 395 aaKnown RBP23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 PBX1P40424 430 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 TPI1P60174 286 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 HNRNPDQ14103 355 aaKnown RBP23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 SLC45A4Q5BKX6 768 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 PRPF39Q86UA1 669 aaKnown RBP23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 RYBPQ8N488 228 aaPredicted RBP23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 EBF2Q9HAK2 575 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 GPATCH2LQ9NWQ4 482 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 MYO1AQ9UBC5 1043 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 AP4E1Q9UPM8 1137 aa23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 BZW2Q9Y6E2 419 aaKnown RBP23.99■■□□□ 1.43
RHBDF1-208ENST00000482904 FGF10O15520 208 aaPredicted RBP23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 LEFTY1O75610 366 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 RNF8O76064 485 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 CCT8P50990 548 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 CCNHP51946 323 aaPredicted RBP23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 ZBED6P86452 979 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 CARD16Q5EG05 197 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 ARSIQ5FYB1 569 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 PIP5KL1Q5T9C9 394 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 NAPEPLDQ6IQ20 393 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 LEKR1Q6ZMV7 388 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 SETD7Q8WTS6 366 aaKnown RBP23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 ARRDC3Q96B67 414 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 CAMK1GQ96NX5 476 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 HEPHQ9BQS7 1158 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 ZDHHC6Q9H6R6 413 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 PREBQ9HCU5 417 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 MRPL47Q9HD33 250 aaKnown RBP23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 ACTL7AQ9Y615 435 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 DOCK4Q8N1I0 1966 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 CACNA1EQ15878 2313 aa23.98■■□□□ 1.43
RHBDF1-208ENST00000482904 CXorf51AA0A1B0GTR3 108 aa23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 VILLO15195 856 aa23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 CD38P28907 300 aa23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 TRIM69Q86WT6 500 aa23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 ASCC3Q8N3C0 2202 aaKnown RBP23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 SYN2Q92777 582 aaPredicted RBP23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 DHX35Q9H5Z1 703 aaKnown RBP23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 PCSK1NQ9UHG2 260 aa23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 LUC7L2Q9Y383 392 aaKnown RBP23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 WASF2Q9Y6W5 498 aa23.97■■□□□ 1.43
RHBDF1-208ENST00000482904 TMEM191CA6NGB0 347 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 ZSCAN5CA6NGD5 496 aaPredicted RBP23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 LATO43561 262 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 BUB1O43683 1085 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 PRPSAP2O60256 369 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 ZNF821O75541 412 aaPredicted RBP23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 SERPING1P05155 500 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 HTR7P34969 479 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 NUDT1P36639 197 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 CTSKP43235 329 aa23.96■■□□□ 1.43
RHBDF1-208ENST00000482904 SUZ12Q15022 739 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms