RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TMEM176AQ96HP8 235 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 MSLNLQ96KJ4 702 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CDCA3Q99618 268 aaPredicted RBP6.95□□□□□ -1.3
CLK1-212ENST00000482590 PYM1Q9BRP8 204 aaKnown RBP6.95□□□□□ -1.3
CLK1-212ENST00000482590 MS4A5Q9H3V2 200 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CYP4F11Q9HBI6 524 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 PNPLA8Q9NP80 782 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 OBP2BQ9NPH6 170 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 ENTPD7Q9NQZ7 604 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 RGS18Q9NS28 235 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 TMEM161AQ9NX61 479 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 TBK1Q9UHD2 729 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 VPS28Q9UK41 221 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 ST3GAL5Q9UNP4 418 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 RABL2BQ9UNT1 228 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
CLK1-212ENST00000482590 CEP83Q9Y592 693 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 PCDHA10Q9Y5I2 948 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 C17orf113A0A1B0GUU1 675 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 CCDC66A2RUB6 948 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 PMS2P1A4D2B8 440 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 INO80B-WBP1J3KQ70 363 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 RTCAO00442 366 aaKnown RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 MAGEB2O15479 319 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 KDM1AO60341 852 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 IL18RAPO95256 599 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 GLP2RO95838 553 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 ADRB2P07550 413 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 MMEP08473 750 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 CYP3A4P08684 503 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 STMN1P16949 149 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 ENPP1P22413 925 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 HPDP32754 393 aaPredicted RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 HOXD13P35453 343 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 TNNT3P45378 269 aaPredicted RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 CLCN3P51790 818 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 VAMP2P63027 116 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 PRKCEQ02156 737 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 NHLH1Q02575 133 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 MAPK7Q13164 816 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 DAG1Q14118 895 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 BECN1Q14457 450 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 DUSP6Q16828 381 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 TOR2AQ5JU69 321 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 HAUS3Q68CZ6 603 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 BLOC1S2Q6QNY1 142 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 CENPQQ7L2Z9 268 aaPredicted RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 MOGAT3Q86VF5 341 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 TMPRSS6Q8IU80 811 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 CCDC33Q8N5R6 958 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 RNF169Q8NCN4 708 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 MRPS27Q92552 414 aaKnown RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 JAKMIP1Q96N16 626 aaKnown RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 ZNF558Q96NG5 402 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 DESI2Q9BSY9 194 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 PHF7Q9BWX1 381 aaPredicted RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 TEKT3Q9BXF9 490 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 ZMYND12Q9H0C1 365 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 TMEM117Q9H0C3 514 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 TRPV4Q9HBA0 871 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 KIF17Q9P2E2 1029 aa6.94□□□□□ -1.3
CLK1-212ENST00000482590 C19orf53Q9UNZ5 99 aaPredicted RBP6.94□□□□□ -1.3
CLK1-212ENST00000482590 MIA3Q5JRA6 1907 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 LGALS16A8MUM7 142 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 CAPN14A8MX76 684 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 PER2O15055 1255 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 GSTA4O15217 222 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 CHMP2AO43633 222 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 OSMP13725 252 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 ALOX15P16050 662 aaPredicted RBP6.93□□□□□ -1.3
CLK1-212ENST00000482590 SFNP31947 248 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 ACTN2P35609 894 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 DNM2P50570 870 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 PDE6CP51160 858 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 JAK3P52333 1124 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 NLRP11P59045 1033 aaKnown RBP6.93□□□□□ -1.3
CLK1-212ENST00000482590 KRT17Q04695 432 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 ERV3-1Q14264 604 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 ARMC4Q5T2S8 1044 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 LRCH2Q5VUJ6 765 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 EFCAB12Q6NXP0 572 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 RPUSD3Q6P087 351 aaKnown RBP6.93□□□□□ -1.3
CLK1-212ENST00000482590 ABRAXAS1Q6UWZ7 409 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 UNC5DQ6UXZ4 953 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 KCNK18Q7Z418 384 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 SAMD14Q8IZD0 417 aaPredicted RBP6.93□□□□□ -1.3
CLK1-212ENST00000482590 LRRC71Q8N4P6 559 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 WDR48Q8TAF3 677 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 CRYGNQ8WXF5 182 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 CASP10Q92851 521 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 RPGRIP1Q96KN7 1286 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 SLC2A13Q96QE2 648 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 AGAP2Q99490 1192 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 PRRX2Q99811 253 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 TCF25Q9BQ70 676 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 BOCQ9BWV1 1114 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 RNF26Q9BY78 433 aaPredicted RBP6.93□□□□□ -1.3
CLK1-212ENST00000482590 AGXT2Q9BYV1 514 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 CWH43Q9H720 699 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms