RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 EID2Q8N6I1 236 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 NEK11Q8NG66 645 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 OR7D4Q8NG98 312 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 JOSD2Q8TAC2 188 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 RXFP2Q8WXD0 754 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 KLHDC7BQ96G42 594 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 CNDP2Q96KP4 475 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 CEP44Q9C0F1 390 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 ANO10Q9NW15 660 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 OR12D3Q9UGF7 316 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
CTDSP1-208ENST00000482272 CHD5Q8TDI0 1954 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 CXorf51AA0A1B0GTR3 108 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 TAF4O00268 1085 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 ENC1O14682 589 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 C1SP09871 688 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 KRT3P12035 628 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 UNGP13051 313 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 EPHA8P29322 1005 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 NSFP46459 744 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 DNA2P51530 1060 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 TAS2R38P59533 333 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 NRG1Q02297 640 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 PTP4A2Q12974 167 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 BNIP3Q12983 259 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 SHBQ15464 509 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 CCDC14Q49A88 953 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 CARD16Q5EG05 197 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 PIP5KL1Q5T9C9 394 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 RWDD4Q6NW29 188 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 C22orf39Q6P5X5 142 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 DPY19L3Q6ZPD9 716 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 ERN2Q76MJ5 926 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 DRC7Q8IY82 874 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 PCDH20Q8N6Y1 951 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 CHST14Q8NCH0 376 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 SLC30A5Q8TAD4 765 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 ARRDC3Q96B67 414 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 HEPHQ9BQS7 1158 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 C11orf70Q9BRQ4 267 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 SELENOOQ9BVL4 669 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 HDAC8Q9BY41 377 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 OSBPL2Q9H1P3 480 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 TNKS2Q9H2K2 1166 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 CAAP1Q9H8G2 361 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 HPCAL4Q9UM19 191 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 NEU3Q9UQ49 428 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 ACTL7AQ9Y615 435 aa13.73□□□□□ -0.21
CTDSP1-208ENST00000482272 ZZEF1O43149 2961 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 CFAP47Q6ZTR5 3102 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 LRRC10BA6NIK2 292 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 SLC31A1O15431 190 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 LEFTY1O75610 366 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 PCDH8O95206 1070 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 PTPN9P43378 593 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 SERPINH1P50454 418 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 GEMIN4P57678 1058 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 UBXN1Q04323 297 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 SMAD1Q15797 465 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 C15orf59Q2T9L4 293 aaPredicted RBP13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 DHRS13Q6UX07 377 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 TMPRSS12Q86WS5 348 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 HORMAD1Q86X24 394 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 FAM174AQ8TBP5 190 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 GRIN3AQ8TCU5 1115 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 FEM1CQ96JP0 617 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 NDFIP2Q9NV92 336 aa13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 LIMA1Q9UHB6 759 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-208ENST00000482272 TRABD2BA6NFA1 517 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 C2CD4BA6NLJ0 364 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 FAM72CH0Y354 149 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 ZNF821O75541 412 aaPredicted RBP13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 RFPL3O75679 317 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 ZMPSTE24O75844 475 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 CALB1P05937 261 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 CCDC172P0C7W6 258 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 THEGLP0DJG4 465 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 RHOQP17081 205 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 HNRNPA2B1P22626 353 aaKnown RBP13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 AKT2P31751 481 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 MAPKAPK2P49137 400 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 NEK3P51956 506 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 ARF5P84085 180 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 MYL5Q02045 173 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 STX1AQ16623 288 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 HS1BP3Q53T59 392 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 FAM72AQ5TYM5 149 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 FAM72DQ6L9T8 149 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 FBXL19Q6PCT2 694 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 FAM72BQ86X60 149 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 PHF13Q86YI8 300 aaPredicted RBP13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 PLPP6Q8IY26 295 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms