RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TMIEQ8NEW7 156 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 OR2I1PQ8NGU4 316 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 GRIN3AQ8TCU5 1115 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 PPP1R16AQ96I34 528 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 NCAPGQ9BPX3 1015 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 ORAI3Q9BRQ5 295 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 TNKS2Q9H2K2 1166 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 SLC32A1Q9H598 525 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 DYRK4Q9NR20 520 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 DONSONQ9NYP3 566 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 IL36AQ9UHA7 158 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 AP4E1Q9UPM8 1137 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 SLCO1B1Q9Y6L6 691 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CACNA1AO00555 2505 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 WDR87Q6ZQQ6 2873 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3DA0A087WVF3 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3IA0A087WXS9 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3EA0A087X179 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3KA0A087X1G2 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3FA6NER0 549 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 ZSCAN5CA6NGD5 496 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3LB9A6J9 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 PLK4O00444 970 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 LATO43561 262 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 KDELR3O43731 214 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 PRPSAP2O60256 369 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 ZNF821O75541 412 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 GJB3O75712 270 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3HP0C7X1 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 CASP14P31944 242 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 DNA2P51530 1060 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 YBEYP58557 167 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TPI1P60174 286 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TRIM14Q14142 442 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 HLA-BQ31612 363 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 PARP15Q460N3 678 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 CARD16Q5EG05 197 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 ERMARDQ5T6L9 678 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 SPECC1LQ69YQ0 1117 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3GQ6DHY5 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3CQ6IPX1 549 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 DPY19L3Q6ZPD9 716 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 ADAT2Q7Z6V5 191 aaKnown RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 ZNF354CQ86Y25 554 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 PSTKQ8IV42 348 aaKnown RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TBC1D3Q8IZP1 549 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 UMODL1-AS1Q8N2C9 162 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 ARFGAP1Q8N6T3 406 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 CHST14Q8NCH0 376 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 DEFB124Q8NES8 71 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 TRIM7Q9C029 511 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 DHX35Q9H5Z1 703 aaKnown RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 GAREM1Q9H706 876 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 PCSK1NQ9UHG2 260 aa12.12□□□□□ -0.47
HMGN1-213ENST00000482192 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
HMGN1-213ENST00000482192 A0A087X0T9 212 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 VILLO15195 856 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 LRCH4O75427 683 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 CD160O95971 181 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 FAM228BP0C875 321 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 ZNF883P0CG24 379 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 CD59P13987 128 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 MIPP30301 263 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 HNRNPH3P31942 346 aaKnown RBP12.11□□□□□ -0.47
HMGN1-213ENST00000482192 NUDT1P36639 197 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 CCNHP51946 323 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-213ENST00000482192 PPP2CBP62714 309 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 PPP2CAP67775 309 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 BNC1Q01954 994 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 ACAP1Q15027 740 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 KIF19Q2TAC6 998 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 PIP5KL1Q5T9C9 394 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 N4BP2L1Q5TBK1 243 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-213ENST00000482192 PIP4P1Q86T03 277 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 TRIM69Q86WT6 500 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 PLPP6Q8IY26 295 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 CASKIN2Q8WXE0 1202 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 SKA1Q96BD8 255 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 LRIG1Q96JA1 1093 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 SLC6A18Q96N87 628 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 PEBP4Q96S96 227 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 HEPHQ9BQS7 1158 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 SNRNP25Q9BV90 132 aaKnown RBP12.11□□□□□ -0.47
HMGN1-213ENST00000482192 HDAC8Q9BY41 377 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 THAP2Q9H0W7 228 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 NOL6Q9H6R4 1146 aaKnown RBP12.11□□□□□ -0.47
HMGN1-213ENST00000482192 PREBQ9HCU5 417 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 GPATCH2LQ9NWQ4 482 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 ARHGAP20Q9P2F6 1191 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 ANKRD6Q9Y2G4 727 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 WASF2Q9Y6W5 498 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 DNAH14Q0VDD8 3507 aa12.11□□□□□ -0.47
HMGN1-213ENST00000482192 RASA4BC9J798 803 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 EEF2KO00418 725 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms