RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 B3GNT8Q7Z7M8 397 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 VASH2Q86V25 355 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 PTRH1Q86Y79 214 aaKnown RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 ATP6V0D2Q8N8Y2 350 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 CLEC18CQ8NCF0 446 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 TMIEQ8NEW7 156 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 ZNF564Q8TBZ8 553 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 SLC17A9Q9BYT1 436 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 ADNPQ9H2P0 1102 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 IGSF5Q9NSI5 407 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 PISDQ9UG56 409 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 VPS28Q9UK41 221 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 PADI4Q9UM07 663 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 NAALADL1Q9UQQ1 740 aa15.31■□□□□ 0.04
HDAC6-224ENST00000481929 TEP1Q99973 2627 aaKnown RBP15.31■□□□□ 0.04
HDAC6-224ENST00000481929 M0QYV0 167 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 NVLO15381 856 aaKnown RBP15.3■□□□□ 0.04
HDAC6-224ENST00000481929 SART1O43290 800 aaKnown RBP15.3■□□□□ 0.04
HDAC6-224ENST00000481929 PRNPP04156 253 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 ANXA6P08133 673 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 HGFP14210 728 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 RPS21P63220 83 aaKnown RBP15.3■□□□□ 0.04
HDAC6-224ENST00000481929 CYP4F2P78329 520 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 MORC3Q14149 939 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 CLCA4Q14CN2 919 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 SKIDA1Q1XH10 827 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 KIAA1161Q6NSJ0 714 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 ESRP1Q6NXG1 681 aaKnown RBP15.3■□□□□ 0.04
HDAC6-224ENST00000481929 ALG14Q96F25 216 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 PPP1R16AQ96I34 528 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 HSFY1Q96LI6 401 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 GFM1Q96RP9 751 aaKnown RBP15.3■□□□□ 0.04
HDAC6-224ENST00000481929 FEM1AQ9BSK4 669 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 FUCA2Q9BTY2 467 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 HDAC8Q9BY41 377 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 APOBEC3BQ9UH17 382 aaKnown RBP15.3■□□□□ 0.04
HDAC6-224ENST00000481929 SERTAD1Q9UHV2 236 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 SLC12A6Q9UHW9 1150 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 PCDHB11Q9Y5F2 797 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 NBPF19A0A087WUL8 3843 aa15.3■□□□□ 0.04
HDAC6-224ENST00000481929 D6RAR5 112 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 LMO7DNF2Z398 122 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 FPGTO14772 594 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 PAK4O96013 591 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-224ENST00000481929 SRCP12931 536 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 ADKP55263 362 aaKnown RBP15.29■□□□□ 0.04
HDAC6-224ENST00000481929 EIF2B5Q13144 721 aaKnown RBP15.29■□□□□ 0.04
HDAC6-224ENST00000481929 ADAM9Q13443 819 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 FGL2Q14314 439 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 IGFBP7Q16270 282 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 PRRT3Q5FWE3 981 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 RBFAQ8N0V3 343 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 FAM26EQ8N5C1 309 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 OR2A12Q8NGT7 310 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 HTR3CQ8WXA8 447 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 TFAP2BQ92481 460 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 FEM1CQ96JP0 617 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 PPP1R13BQ96KQ4 1090 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 PSMG3-AS1Q96PY0 264 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 PRMT1Q99873 361 aaKnown RBP15.29■□□□□ 0.04
HDAC6-224ENST00000481929 TRIM62Q9BVG3 475 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 FOXP3Q9BZS1 431 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 HS3ST2Q9Y278 367 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 RELNP78509 3460 aa15.29■□□□□ 0.04
HDAC6-224ENST00000481929 KCNU1A8MYU2 1149 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 RAD51BO15315 384 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 GCATO75600 419 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 PAEPP09466 180 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 NEK3P51956 506 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 CENPCQ03188 943 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 C1orf61Q13536 156 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 CNGA2Q16280 664 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 TPRG1LQ5T0D9 272 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 SYPL2Q5VXT5 272 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 RESP18Q5W5W9 173 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 PHACTR4Q8IZ21 702 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 ATP11CQ8NB49 1132 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 OR52K2Q8NGK3 314 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 GRIN3AQ8TCU5 1115 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 PAGE5Q96GU1 130 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 TBATAQ96M53 351 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 TMEM74Q96NL1 305 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 RPRD1AQ96P16 312 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-224ENST00000481929 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC6-224ENST00000481929 LOXL2Q9Y4K0 774 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 OR51B4Q9Y5P0 310 aa15.28■□□□□ 0.04
HDAC6-224ENST00000481929 PRAMEF33A0A0G2JMD5 474 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 BLACEA4D250 179 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 SPINT1O43278 529 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 PRAMEF10O60809 474 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 TRUB2O95900 331 aaKnown RBP15.27■□□□□ 0.04
HDAC6-224ENST00000481929 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 WT1P19544 449 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-224ENST00000481929 TBXAS1P24557 533 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-224ENST00000481929 CCKBRP32239 447 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 NOS2P35228 1153 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 CASRP41180 1078 aa15.27■□□□□ 0.04
HDAC6-224ENST00000481929 MCCD1P59942 119 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-224ENST00000481929 KRT83P78385 493 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms