RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ARHGEF15O94989 841 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 TROVE2P10155 538 aaKnown RBP eCLIP16.04■□□□□ 0.162e-8■□□□□ 10.2
RXRA-202ENST00000481739 ALDH3A1P30838 453 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 RENBPP51606 427 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 CRADDP78560 199 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 VEPH1Q14D04 833 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 KLHDC10Q6PID8 442 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 KYAT3Q6YP21 454 aaKnown RBP16.04■□□□□ 0.16
RXRA-202ENST00000481739 FAM47EQ6ZV65 393 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 RASSF3Q86WH2 238 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 SPPL3Q8TCT6 385 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 FAM111AQ96PZ2 611 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 EMILIN2Q9BXX0 1053 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 RASSF4Q9H2L5 321 aa16.04■□□□□ 0.16
RXRA-202ENST00000481739 IPO11Q9UI26 975 aaKnown RBP16.04■□□□□ 0.16
RXRA-202ENST00000481739 DRGXA6NNA5 263 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 ADH1AP07327 375 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 HADHAP40939 763 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 SERPINB4P48594 390 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 MAPKAPK2P49137 400 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TNK2Q07912 1038 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TWF1Q12792 350 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 ANKRD20A4Q4UJ75 823 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 SNX30Q5VWJ9 437 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 POTEHQ6S545 545 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TNS4Q8IZW8 715 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 NSMCE1Q8WV22 266 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 ZNF669Q96BR6 464 aaPredicted RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 KLHL5Q96PQ7 755 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TBL1YQ9BQ87 522 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 KIFC1Q9BW19 673 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 MRM3Q9HC36 420 aaKnown RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 TLR9Q9NR96 1032 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 USH1CQ9Y6N9 552 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 HMX2A2RU54 273 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 ANKRD65E5RJM6 399 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 BIRC5O15392 142 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TGM5O43548 720 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TLR5O60602 858 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TGDSO95455 350 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 DNAJB1P25685 340 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 SPRP35270 261 aaPredicted RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 PAPOLAP51003 745 aaKnown RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 EPHB3P54753 998 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 CSE1LP55060 971 aaKnown RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 YBEYP58557 167 aaPredicted RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 MPP3Q13368 585 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 INSCQ1MX18 579 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 PARP15Q460N3 678 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 MROH9Q5TGP6 573 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 CGB2Q6NT52 195 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 C10orf67Q8IYJ2 551 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 TCEAL8Q8IYN2 117 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 NDUFAF2Q8N183 169 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 CCDC63Q8NA47 563 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 ISL2Q96A47 359 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 ZNF512Q96ME7 567 aaPredicted RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 TRIM56Q9BRZ2 755 aaKnown RBP16.03■□□□□ 0.16
RXRA-202ENST00000481739 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 MPP6Q9NZW5 540 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 SLC12A4Q9UP95 1085 aa16.03■□□□□ 0.16
RXRA-202ENST00000481739 ZCWPW2A0A1B0GU75 182 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 SLC12A8A0AV02 714 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 HIDE1A8MVS5 230 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 UGT1A9O60656 530 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 GLRA3O75311 464 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 DCTN3O75935 186 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 RB1P06400 928 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 ITGA2BP08514 1039 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 LIG3P49916 1009 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 UBE3AQ05086 875 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 BMPR2Q13873 1038 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 PCID2Q5JVF3 399 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 SPDYAQ5MJ70 313 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 ATG16L1Q676U5 607 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 PDPK2PQ6A1A2 396 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 UGT1A7Q9HAW7 530 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 UGT1A10Q9HAW8 530 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 UGT1A8Q9HAW9 530 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 RBM22Q9NW64 420 aaKnown RBP eCLIP16.02■□□□□ 0.163e-6■■■■□ 21.3
RXRA-202ENST00000481739 DNMT3LQ9UJW3 386 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 MAFFQ9ULX9 164 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 INSL5Q9Y5Q6 135 aa16.02■□□□□ 0.16
RXRA-202ENST00000481739 C5orf67F2Z3F1 127 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 H0YHG0 523 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 GRM6O15303 877 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 TIMM44O43615 452 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 USP12O75317 370 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 NEFHP12036 1026 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 SCTRP47872 440 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 PLD1Q13393 1074 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 SETDB1Q15047 1291 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 MIB1Q86YT6 1006 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 MRPL43Q8N983 215 aaKnown RBP16.01■□□□□ 0.15
RXRA-202ENST00000481739 FSD1LQ9BXM9 530 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 SLC25A51Q9H1U9 297 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 CERS4Q9HA82 394 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 PIH1D1Q9NWS0 290 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms