RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 PCDH9Q9HC56 1237 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 NT5MQ9NPB1 228 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 DONSONQ9NYP3 566 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 DEC1Q9P2X7 70 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 UBA2Q9UBT2 640 aaPredicted RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 HS3ST2Q9Y278 367 aa9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
NUDCD3-208ENST00000480209 LRRK1Q38SD2 2015 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 A0A0A0MRY4 1105 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ESYT3A0FGR9 886 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 CFAP69A5D8W1 941 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 C5orf60A6NFR6 353 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 GCATO75600 419 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 HEXIM1O94992 359 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 EGFP01133 1207 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 JCHAINP01591 159 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 KRT14P02533 472 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 MMP2P08253 660 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 RHOXF2BP0C7M4 288 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 SRCP12931 536 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 CD72P21854 359 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 IVDP26440 423 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 PSMB4P28070 264 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 EIF2DP41214 584 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 RPL21P46778 160 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 SERPINH1P50454 418 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 GALK1P51570 392 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 TERF1P54274 439 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 MAXP61244 160 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 NR1H3Q13133 447 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 DHX34Q14147 1143 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 DMC1Q14565 340 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 SYCP2LQ5T4T6 812 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 EGFLAMQ63HQ2 1017 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 TIGD7Q6NT04 549 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 C22orf39Q6P5X5 142 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 TPRG1Q6ZUI0 275 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 BZW1Q7L1Q6 419 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 GSTA5Q7RTV2 222 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 RALGPS2Q86X27 583 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 LRRC49Q8IUZ0 686 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 CCDC117Q8IWD4 279 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 SH2D3CQ8N5H7 860 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF366Q8N895 744 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF557Q8N988 423 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 GRK7Q8WTQ7 553 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 FRS2Q8WU20 508 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ATXN2LQ8WWM7 1075 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 TEKT5Q96M29 485 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 SPATA13Q96N96 652 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF599Q96NL3 588 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 PNKPQ96T60 521 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 P2RY13Q9BPV8 354 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 MGME1Q9BQP7 344 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 RHOXF2Q9BQY4 288 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 MLPHQ9BV36 600 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 TRIM31Q9BZY9 425 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 CIPCQ9C0C6 399 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 TNKS2Q9H2K2 1166 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 MTG2Q9H4K7 406 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 KLHL8Q9P2G9 620 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 DMGDHQ9UI17 866 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 SLCO3A1Q9UIG8 710 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 CA14Q9ULX7 337 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 SORCS3Q9UPU3 1222 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ERVW-1Q9UQF0 538 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 ATP8A1Q9Y2Q0 1164 aa9.12□□□□□ -0.95
NUDCD3-208ENST00000480209 TCRBV7S3A2A0A539 114 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 KRBA1A5PL33 1030 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 K7EQS6 105 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 INSIG1O15503 277 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 TMEM63AO94886 807 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 CR2P20023 1033 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 GRIA2P42262 883 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 MMP13P45452 471 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 DSC2Q02487 901 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 NIPAL4Q0D2K0 466 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 OLIG2Q13516 323 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 HNRNPDQ14103 355 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF235Q14590 738 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 PPP1R7Q15435 360 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 MLF2Q15773 248 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 P3H1Q32P28 736 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 SLC44A4Q53GD3 710 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 TEX44Q53QW1 395 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 TMEM196Q5HYL7 178 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 DGKKQ5KSL6 1271 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 ATXN7L2Q5T6C5 722 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 EMC10Q5UCC4 262 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 ANKRD22Q5VYY1 191 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 DUPD1Q68J44 220 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 ALG1LQ6GMV1 187 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 ZNF687Q8N1G0 1237 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 CCDC89Q8N998 374 aa9.11□□□□□ -0.95
NUDCD3-208ENST00000480209 OR6K2Q8NGY2 324 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms