RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TCRBV9S1A1TA0A576 114 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CXCL11O14625 94 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 AZIN1O14977 448 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PSMD10O75832 226 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ASMTLO95671 621 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 OTCP00480 354 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FGF1P05230 155 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ANXA5P08758 320 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ERFP50548 548 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PKNOX1P55347 436 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 USP46P62068 366 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FOLH1Q04609 750 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ITGADQ13349 1161 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 NR1D2Q14995 579 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 NEDD8Q15843 81 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PABPC1LQ4VXU2 614 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PMF1Q6P1K2 205 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GALNT18Q6P9A2 607 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 MILR1Q7Z6M3 343 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 RELL1Q8IUW5 271 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SEPT12Q8IYM1 358 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FNDC5Q8NAU1 212 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SPPL2AQ8TCT8 520 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 BLOC1S5Q8TDH9 187 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TNFRSF25Q93038 417 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ATG4CQ96DT6 458 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SYT15Q9BQS2 421 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 IL1RL2Q9HB29 575 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SMPD3Q9NY59 655 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CARD8Q9Y2G2 431 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 DISP2A7MBM2 1401 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 NFASCO94856 1347 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 A0A088AWK7 358 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 H0YJX3 145 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 BNIP3LO60238 219 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF682O95780 498 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CNPP09543 421 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 C6orf222P0C671 652 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF10P21506 573 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PTPN3P26045 913 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GPC1P35052 558 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TTPAP49638 278 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 YBEYP58557 167 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CAMK2GQ13555 558 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 BRMS1LQ5PSV4 323 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SPATA19Q7Z5L4 167 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 MCFD2Q8NI22 146 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CHID1Q9BWS9 393 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 POLR1EQ9GZS1 481 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 AGO4Q9HCK5 861 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ARMCX1Q9P291 453 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ST14Q9Y5Y6 855 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 UGT2B11O75310 529 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TNFRSF21O75509 655 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 LTFP02788 710 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ARP10275 920 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GLRA2P23416 452 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 POLR2LP62875 67 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PPATQ06203 517 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PPP3CAQ08209 521 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CDC16Q13042 620 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TCEAL1Q15170 157 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 R3HCC1LQ7Z5L2 792 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GPR180Q86V85 440 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 OOSP2Q86WS3 158 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 C18orf25Q96B23 403 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 RDH12Q96NR8 316 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TAAR1Q96RJ0 339 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FAM126AQ9BYI3 521 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PORCNQ9H237 461 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 C1orf21Q9H246 121 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 NOL6Q9H6R4 1146 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 EIF2B3Q9NR50 452 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 OPTCQ9UBM4 332 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC12A4Q9UP95 1085 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GPC6Q9Y625 555 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ATRNO75882 1429 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 A0A087X0B3 334 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 PIPSLA2A3N6 862 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 SGTAO43765 313 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 PLIN3O60664 434 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 TADA2AO75478 443 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 GRAP2O75791 330 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 EPN2O95208 641 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 PEPDP12955 493 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 RBL1P28749 1068 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 RPA3P35244 121 aaPredicted RBP6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 CCNG1P51959 295 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 PNLIPRP1P54315 467 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 BACE1P56817 501 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 SCN1BQ07699 218 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 SYCE2Q6PIF2 218 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 FAM43BQ6ZT52 329 aaPredicted RBP6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 CDH24Q86UP0 819 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 ZZZ3Q8IYH5 903 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 POC5Q8NA72 575 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 MFSD14AQ96MC6 490 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 FICDQ9BVA6 458 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 CXorf21Q9HAI6 301 aa6.22□□□□□ -1.41
PRPF4B-205ENST00000480058 FNIP2Q9P278 1114 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms