RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TEX44Q53QW1 395 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 BRMS1LQ5PSV4 323 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 SDHAF4Q5VUM1 108 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 CDCA2Q69YH5 1023 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 TNS4Q8IZW8 715 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 CCDC185Q8N715 623 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ECSITQ9BQ95 431 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ZYG11BQ9C0D3 744 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 SNX15Q9NRS6 342 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 SFMBT1Q9UHJ3 866 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 CORO1CQ9ULV4 474 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 PLLPQ9Y342 182 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 USP1O94782 785 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 PSMG1O95456 288 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 GABRB2P47870 512 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 TCHHL1Q5QJ38 904 aaPredicted RBP14.52□□□□□ -0.08
COL20A1-206ENST00000479501 CMC1Q7Z7K0 106 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 P3H2Q8IVL5 708 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 CCDC103Q8IW40 242 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 PYROXD2Q8N2H3 581 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 QKIQ96PU8 341 aaKnown RBP eCLIP14.52□□□□□ -0.08
COL20A1-206ENST00000479501 PTPRJQ12913 1337 aa14.52□□□□□ -0.08
COL20A1-206ENST00000479501 C5orf60A6NFR6 353 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 NR5A2O00482 541 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 TNFAIP8O95379 198 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
COL20A1-206ENST00000479501 ZNF23P17027 643 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 RAP1GDS1P52306 607 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 ANKS6Q68DC2 871 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 CCDC81Q6ZN84 652 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 CYP4X1Q8N118 509 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 FBXO39Q8N4B4 442 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 CASP10Q92851 521 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 C12orf65Q9H3J6 166 aaKnown RBP14.52□□□□□ -0.09
COL20A1-206ENST00000479501 POMKQ9H5K3 350 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 FBXO5Q9UKT4 447 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 PADI3Q9ULW8 664 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 GRIN2DO15399 1336 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 MYO1GB0I1T2 1018 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 ADARP55265 1226 aaKnown RBP14.52□□□□□ -0.09
COL20A1-206ENST00000479501 TCEAL1Q15170 157 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 MON1AQ86VX9 555 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 SLC41A1Q8IVJ1 513 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 RNF148Q8N7C7 305 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 DCUN1D5Q9BTE7 237 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 NMRK2Q9NPI5 230 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 GIMAP4Q9NUV9 329 aa14.52□□□□□ -0.09
COL20A1-206ENST00000479501 SPTLC1O15269 473 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 EDIL3O43854 480 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 DUSP11O75319 330 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 BPGMP07738 259 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 PLIN5Q00G26 463 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 UBE3AQ05086 875 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 TARBP2Q15633 366 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 DDR2Q16832 855 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 CERCAMQ5T4B2 595 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 ECHDC2Q86YB7 292 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 TAGAPQ8N103 731 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 TMEM79Q9BSE2 394 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 THUMPD3Q9BV44 507 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 HNRNPRO43390 633 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 BUD23O43709 281 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 GCATO75600 419 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 TMEM63AO94886 807 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 ATP6V1E1P36543 226 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 PSEN1P49768 467 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 CTBP1Q13363 440 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 GTF2H3Q13889 308 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 FUT11Q495W5 492 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 LACTB2Q53H82 288 aaPredicted RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 TRAF7Q6Q0C0 670 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 POTEHQ6S545 545 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 GLT6D1Q7Z4J2 308 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 FITM2Q8N6M3 262 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 CD101Q93033 1021 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 MTIF3Q9H2K0 278 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 MPP6Q9NZW5 540 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 A0A087X1B8 175 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 PAGE1O75459 146 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 DLGAP3O95886 979 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 OGDHQ02218 1023 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 MRPL28Q13084 256 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 FAM187BQ17R55 369 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 SOWAHAQ2M3V2 549 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 KCTD21Q4G0X4 260 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 CDRT15Q96T59 188 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 YME1L1Q96TA2 773 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 C17orf80Q9BSJ5 609 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 MID1IP1Q9NPA3 183 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 EIF3LQ9Y262 564 aaKnown RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 COL2A1P02458 1487 aaPredicted RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 SF3B1O75533 1304 aaKnown RBP eCLIP14.51□□□□□ -0.093e-6■■■■■ 137.9
COL20A1-206ENST00000479501 FKBP9O95302 570 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 CCDC166P0CW27 439 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 CLCNKBP51801 687 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 MSLNQ13421 630 aaPredicted RBP14.51□□□□□ -0.09
COL20A1-206ENST00000479501 NFYCQ13952 458 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 CA9Q16790 459 aa14.51□□□□□ -0.09
COL20A1-206ENST00000479501 ARHGAP15Q53QZ3 475 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms