RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PRNPP04156 253 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 GLDCP23378 1020 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 SERPINB6P35237 376 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 RECQLP46063 649 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-217ENST00000479161 RFTN1Q14699 578 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-217ENST00000479161 SMTNL2Q2TAL5 461 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 SYCP2LQ5T4T6 812 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 DAB2IPQ5VWQ8 1189 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 TXNRD3NBQ6F5E7 133 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 Q6ZVU0 165 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 SYT12Q8IV01 421 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 MMAAQ8IVH4 418 aaKnown RBP15.77■□□□□ 0.12
C9orf3-217ENST00000479161 ARHGAP12Q8IWW6 846 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 FRMD1Q8N878 549 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 UBE2Q2Q8WVN8 375 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 HMCESQ96FZ2 354 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 MTG2Q9H4K7 406 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 PDFQ9HBH1 243 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 FBXL12Q9NXK8 326 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 EVLQ9UI08 416 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-217ENST00000479161 INVSQ9Y283 1065 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 MFHAS1Q9Y4C4 1052 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 SPTBN4Q9H254 2564 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 SOWAHDA6NJG2 315 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 METTL12A8MUP2 240 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 K7ERQ8 282 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 PRAMEF11O60813 436 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 VAV1P15498 845 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 CHRNA3P32297 505 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 MPLP40238 635 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 CDH6P55285 790 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 SNRPD1P62314 119 aaKnown RBP15.76■□□□□ 0.11
C9orf3-217ENST00000479161 ZNF33AQ06730 810 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 MESDQ14696 234 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 CARD16Q5EG05 197 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 WDR45BQ5MNZ6 344 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 LYSMD4Q5XG99 296 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 TMCO3Q6UWJ1 677 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 LINGO4Q6UY18 593 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 OR2AP1Q8NGE2 309 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 CEP76Q8TAP6 659 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 HSPH1Q92598 858 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 FATE1Q969F0 183 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 ZNF599Q96NL3 588 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 SLC39A8Q9C0K1 460 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 PILRBQ9UKJ0 227 aa15.76■□□□□ 0.11
C9orf3-217ENST00000479161 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 MID1O15344 667 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 BUB1O43683 1085 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 POP4O95707 220 aaKnown RBP15.75■□□□□ 0.11
C9orf3-217ENST00000479161 IL1BP01584 269 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 DRD3P35462 400 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 CSNK1DP48730 415 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 TAS2R40P59535 323 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 IL10RBQ08334 325 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 NSUN2Q08J23 767 aaKnown RBP eCLIP15.75■□□□□ 0.11
C9orf3-217ENST00000479161 DPYSL3Q14195 570 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 KRT81Q14533 505 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 GRM3Q14832 879 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 PAFAH1B3Q15102 231 aaKnown RBP15.75■□□□□ 0.11
C9orf3-217ENST00000479161 LPAL2Q16609 132 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 C11orf63Q6NUN7 778 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 NEK5Q6P3R8 708 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 RAD9BQ6WBX8 426 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 DPY19L3Q6ZPD9 716 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 CYP2U1Q7Z449 544 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 RHOT1Q8IXI2 618 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 TMEFF1Q8IYR6 380 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 KCTD6Q8NC69 237 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 PIP4K2CQ8TBX8 421 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 HCAR2Q8TDS4 363 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 OMDQ99983 421 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 HEPHQ9BQS7 1158 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 HDAC8Q9BY41 377 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 CPEB1Q9BZB8 566 aaKnown RBP15.75■□□□□ 0.11
C9orf3-217ENST00000479161 ARRDC1-AS1Q9H2J1 176 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 SEMA4GQ9NTN9 838 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 DDX56Q9NY93 547 aaKnown RBP15.75■□□□□ 0.11
C9orf3-217ENST00000479161 SUSD2Q9UGT4 822 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 IL36AQ9UHA7 158 aa15.75■□□□□ 0.11
C9orf3-217ENST00000479161 LRRC72A6NJI9 287 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 PRR5-ARHGAP8B1AHC4 643 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 SEMA4FO95754 770 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 SDHBP21912 280 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 AMPD1P23109 780 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 KDELR1P24390 212 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 ACSL1P33121 698 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 NUDT1P36639 197 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 PTGER3P43115 390 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 SSR1P43307 286 aaKnown RBP15.74■□□□□ 0.11
C9orf3-217ENST00000479161 DHPSP49366 369 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-217ENST00000479161 PAPOLAP51003 745 aaKnown RBP15.74■□□□□ 0.11
C9orf3-217ENST00000479161 VAV2P52735 878 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 ARHGAP8P85298 464 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 LMNB2Q03252 620 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 ZSCAN30Q86W11 494 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 SLC41A1Q8IVJ1 513 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 AADATQ8N5Z0 425 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 NPWQ8N729 165 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 CCDC112Q8NEF3 446 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms